Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_031016.1 Length=40273 Score E Sequences producing significant alignments: (Bits) Value seq3316 111 4e-20 >seq3316 Length=958 Score = 111 bits (122), Expect = 4e-20 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 23325 TCAGGGTTAGTATCTGCTAGAATTCTTGCTCCATTCCCCGAACAACGAGAAACAATTTCA 23384 || ||||| ||||| | |||||| || | || || |||||||| |||||| Sbjct 293 TCCGGGTTGGTATCGCAAATAATTCTAGCGTCCTTACCAGAACAACGCTTTTGTATTTCA 234 Query 23385 CCAAATACTTCTTGTTTAGCAAGAGACGCTTCATTGACATAAGCACCATAAGCAGTCATA 23444 ||||||||||||| |||||||| ||||||||||||| ||||||||||| || |||||| Sbjct 233 TCAAATACTTCTTGATTAGCAAGTGACGCTTCATTGATGTAAGCACCATAGGCTGTCATA 174 Query 23445 CCACGAATA 23453 ||||||||| Sbjct 173 CCACGAATA 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128743864563470