Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apis_20mellifera_20[refseq_20GCF_5F000002195.4_202011-01-14] 5,321 sequences; 250,287,000 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq15 131 2e-25 >seq15 Length=10167229 Score = 131 bits (144), Expect = 2e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 ||||| || ||||||||||||| ||| ||||||||| ||||||| |||||| || || Sbjct 2293306 ATCTGCAATGTATGTATCAATTAACAAAGAATACATTTCTGAATGAACATTTTCCATGGC 2293365 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 || ||||| ||||| ||||| | || || | | ||| || || | | ||||| || Sbjct 2293366 AACTTGAAAACCATAGAAACAACGTGCCTCTGTTATTTGTACTTCTTGACTAAATCGTTC 2293425 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | | | ||| || |||||||| |||||| ||| ||||| || || | |||| ||| Sbjct 2293426 AACAAGATTCTCATTAACAATTCCATCAGAAGCTGCAAAAAATGCTAAGACATGAGATAT 2293485 Query 23952 AAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988 ||||||| ||||| | | ||| || ||||||||| Sbjct 2293486 AAAATGTTTTTCACTGGCAGTTAAATTATTCCAATCA 2293522 Score = 102 bits (112), Expect = 8e-17 Identities = 156/218 (72%), Gaps = 12/218 (6%) Strand=Plus/Plus Query 23316 TTTACATGATAATTCCTTTAAAAGC---CTATCTGCTACAAATTCAATATATTGACACAT 23372 |||||| |||||| || |||| |||||||| |||||||| |||||||||||||| Sbjct 2292666 TTTACAACCTAATTC---TACAAGCAATCTATCTGCAACAAATTCGATATATTGACACAT 2292722 Query 23373 CAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTC 23432 | | | | || || ||||| | || || || | ||||| || ||| || ||| Sbjct 2292723 AAGTTTACAATTCATGCCTATCATTTCAACAGGTAATGCATCTGTCAAAAATTCTTGTTC 2292782 Query 23433 AATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAA 23492 ||| ||||||||||||| || |||| | ||| ||||| || ||| | || || Sbjct 2292783 AATTTTGACAGCATCTTTAA-TAATTGA--TGTGACTCGTTCACAAGATGGTTTTTGTAC 2292839 Query 23493 A---TACTTAAACAATAAACATGCAAAATCACAATGTA 23527 | | || |||| ||||||||||||||||||||||| Sbjct 2292840 AATGTGTTTGAACATTAAACATGCAAAATCACAATGTA 2292877 Score = 82.4 bits (90), Expect = 8e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||| || ||| |||||||||||| || || | |||| || || ||||||||||| || Sbjct 2292484 CATTACTCCCCATTTTTGATATTCTCCCACTTTTTTTTCAAAGAAGTTTGTCTTACCTTC 2292543 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATT 23297 ||| || |||| |||||| |||||||| ||||| Sbjct 2292544 TAAAGAAATATGTTCCATGAAATCAAACGGATT 2292576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521453314529400