Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 188 3e-42 seq908 98.7 4e-15 >seq1 Length=2798100 Score = 188 bits (208), Expect = 3e-42 Identities = 253/347 (73%), Gaps = 10/347 (3%) Strand=Plus/Minus Query 451270 TACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328 ||| ||| |||||||| |||||||| ||| |||| ||| | ||||| || | Sbjct 659502 TACAAAACATGAAAGAGGCAGCAGAAGCTTATCTTGGAGGGGAAGTAAAAGATGCTGTGA 659443 Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 | || || || || || ||||||||| | ||||| |||||||| |||||||||||| | | Sbjct 659442 TAACAGTGCCAGCATACTTCAATGATTCTCAACGTCAAGCAACAAAAGATGCAGGAAAAA 659383 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 ||||||| |||||||| || | || ||||| ||||| || || || || || || |||| Sbjct 659382 TTGCTGGATTAAATGTGCTCAGGATAATTAACGAACCAACTGCTGCAGCACTTGCTTATG 659323 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 | || | || ||||| || || | | |||| |||| | |||| ||||||| | Sbjct 659322 GTCTTG----ATAAAAAG-CACGGA--CACACAATA--GTAGTGTATGATCTTGGTGGTG 659272 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568 | || ||| ||| ||||| ||| | ||||| || || ||||| || || || | Sbjct 659271 GTACATTTGACGTTTCAATACTTGAAATAGGTGATGGAGTTTTCGAAGTGAAAGCGACAA 659212 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTG 451615 | |||||||||||||| || ||||||||| ||||||||||| | ||| Sbjct 659211 ACGGTGATACTCATCTGGGTGGTGAAGATTTTGATAATGCAGTAGTG 659165 Score = 188 bits (208), Expect = 3e-42 Identities = 253/347 (73%), Gaps = 10/347 (3%) Strand=Plus/Plus Query 451270 TACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328 ||| ||| |||||||| |||||||| ||| |||| ||| | ||||| || | Sbjct 1782684 TACAAAACATGAAAGAGGCAGCAGAAGCTTATCTTGGAGGGGAAGTAAAAGATGCTGTGA 1782743 Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 | || || || || || ||||||||| | ||||| |||||||| |||||||||||| | | Sbjct 1782744 TAACAGTGCCAGCATACTTCAATGATTCTCAACGTCAAGCAACAAAAGATGCAGGAAAAA 1782803 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 ||||||| |||||||| || | || ||||| ||||| || || || || || || |||| Sbjct 1782804 TTGCTGGATTAAATGTGCTCAGGATAATTAACGAACCAACTGCTGCAGCACTTGCTTATG 1782863 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 | || | || ||||| || || | | |||| |||| | |||| ||||||| | Sbjct 1782864 GTCTTG----ATAAAAAG-CACGGA--CACACAATA--GTAGTGTATGATCTTGGTGGTG 1782914 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568 | || ||| ||| ||||| ||| | ||||| || || ||||| || || || | Sbjct 1782915 GTACATTTGACGTTTCAATACTTGAAATAGGTGATGGAGTTTTCGAAGTGAAAGCGACAA 1782974 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTG 451615 | |||||||||||||| || ||||||||| ||||||||||| | ||| Sbjct 1782975 ACGGTGATACTCATCTGGGTGGTGAAGATTTTGATAATGCAGTAGTG 1783021 >seq908 Length=5603 Score = 98.7 bits (108), Expect = 4e-15 Identities = 178/253 (70%), Gaps = 8/253 (3%) Strand=Plus/Minus Query 420693 AATAATAACT-TCCCCAAATGTATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAA 420751 |||||||||| | ||| | ||||||| ||||| | ||||| || ||||||||||||| Sbjct 3458 AATAATAACTGTTCCCGTA-GTATCAAGACCTCTACGACCAGCACGACCTGCCATTTGAA 3400 Query 420752 GAAATTCATCAGTTCGTAAGA-ATCT-TCTACCACAATC-ATCATATTTAGATAATCCAG 420808 | ||||| || | | || ||| | | | | || ||||| |||| || | Sbjct 3399 TATATTCAC---TTGGAAGGAGATCCCTAAATCTTATTCCATCATGTTTACGTATAGAAT 3343 Query 420809 TAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACA 420868 ||||||||||| | ||| |||||||| ||||| | || ||| ||||| || || || | Sbjct 3342 CAAATACAACAGATCTTGCTGGCATATTAACACCCATAGCAAATGTTTCTGTAGCAAAAA 3283 Query 420869 AAACTTTAATTAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTA 420928 || || | |||| ||| | | | | || ||||||| |||||| | ||| |||| || Sbjct 3282 GAAGCTTTACTAATCCTTTGGCAAACAACATCTCAACAACTTCTTTAAGAATTGGAAGTA 3223 Query 420929 TACCAGAATGATG 420941 | ||| |||||| Sbjct 3222 TTCCACTATGATG 3210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975665342082368