Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 163 2e-34 >seq1 Length=2798100 Score = 163 bits (180), Expect = 2e-34 Identities = 235/331 (71%), Gaps = 8/331 (2%) Strand=Plus/Plus Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 |||||||||||||||||| |||| | ||||| || || ||| | |||| ||||| Sbjct 659174 ATTATCAAAATCTTCACCACCCAGATGAGTATCACCGTTTGTCGCTTTCACTTCGAAAAC 659233 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 |||||| | | | | | || ||| || |||||||| | |||| | | | Sbjct 659234 TCCATCACCTATTTCAAGTATTGAAACGTCAAATGTACCACCACCAAGATCATACACTAC 659293 Query 518143 TACATTCATTTCTTTGTCT-TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 || || | |||| || ||||||||||||||||| |||| || |||||||||| Sbjct 659294 TA-------TTGTGTGTCCGTGCTTTTTATCAAGACCATAAGCAAGTGCTGCAGCAGTTG 659346 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 |||| ||||| || || | ||||| | ||||||||| ||||||||||||| || |||| Sbjct 659347 GTTCGTTAATTATCCTGAGCACATTTAATCCAGCAATTTTTCCTGCATCTTTTGTTGCTT 659406 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321 | | ||| ||||| || || ||||| || || || || || ||||| ||||||| | Sbjct 659407 GACGTTGAGAATCATTGAAGTATGCTGGCACTGTTATCACAGCATCTTTTACTTCCCCTC 659466 Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 ||| |||||| ||| | | |||||| || Sbjct 659467 CAAGATAAGCTTCTGCTGCCTCTTTCATGTT 659497 Score = 163 bits (180), Expect = 2e-34 Identities = 235/331 (71%), Gaps = 8/331 (2%) Strand=Plus/Minus Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 |||||||||||||||||| |||| | ||||| || || ||| | |||| ||||| Sbjct 1783012 ATTATCAAAATCTTCACCACCCAGATGAGTATCACCGTTTGTCGCTTTCACTTCGAAAAC 1782953 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 |||||| | | | | | || ||| || |||||||| | |||| | | | Sbjct 1782952 TCCATCACCTATTTCAAGTATTGAAACGTCAAATGTACCACCACCAAGATCATACACTAC 1782893 Query 518143 TACATTCATTTCTTTGTCT-TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 || || | |||| || ||||||||||||||||| |||| || |||||||||| Sbjct 1782892 TA-------TTGTGTGTCCGTGCTTTTTATCAAGACCATAAGCAAGTGCTGCAGCAGTTG 1782840 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 |||| ||||| || || | ||||| | ||||||||| ||||||||||||| || |||| Sbjct 1782839 GTTCGTTAATTATCCTGAGCACATTTAATCCAGCAATTTTTCCTGCATCTTTTGTTGCTT 1782780 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321 | | ||| ||||| || || ||||| || || || || || ||||| ||||||| | Sbjct 1782779 GACGTTGAGAATCATTGAAGTATGCTGGCACTGTTATCACAGCATCTTTTACTTCCCCTC 1782720 Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 ||| |||||| ||| | | |||||| || Sbjct 1782719 CAAGATAAGCTTCTGCTGCCTCTTTCATGTT 1782689 Score = 136 bits (150), Expect = 3e-26 Identities = 253/370 (68%), Gaps = 16/370 (4%) Strand=Plus/Plus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || ||||| ||||| | ||||||||| ||||||||||| || || || | | ||||||| Sbjct 658428 ATTCCATTTGCATCTATATCAAATGTCACTTCAATTTGTGGAACTCCACGCGGAGCAGGA 658487 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || ||||| ||| ||||| || || || ||||| | ||||||| |||| Sbjct 658488 GGTATTCCTTCTAAACTAAATTGACCAAGTAACTTGTTATCAACTGCCAATTTTCTTTCA 658547 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||| | | || ||||| | |||||||||||| ||||| ||| || | Sbjct 658548 CCCTGATGCACCTTAATTGTAACAGCTGTTTGATTATCTTCTGCAGTTGAAAACACCTGG 658607 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA--CCACCTG 517511 ||||||||| ||||| || || || | |||||| | ||| |||| || ||| Sbjct 658608 GATTTTTTAGTGGGAATAGTAGTATTACGTTCAATA--AGTGGAGTGAATACTCCTCCTA 658665 Query 517512 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 517571 ||||| | |||||||||||| ||||| || |||| ||| | | || | || Sbjct 658666 GAGTTTCAATACCAAGAGAAAGTGGAGTCACGTCAAGTAGTAACACAT------CTCTTA 658719 Query 517572 CATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 517631 ||||| ||| || || |||| || || ||||| ||| ||| ||| |||||| Sbjct 658720 CATCACCTTG------AATGATCCCTGCCTGTATTGCAGCTCCAATTGCTACAACTTCAT 658773 Query 517632 CAGGATTAAC 517641 ||||||| || Sbjct 658774 CAGGATTGAC 658783 Score = 136 bits (150), Expect = 3e-26 Identities = 253/370 (68%), Gaps = 16/370 (4%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || ||||| ||||| | ||||||||| ||||||||||| || || || | | ||||||| Sbjct 1783758 ATTCCATTTGCATCTATATCAAATGTCACTTCAATTTGTGGAACTCCACGCGGAGCAGGA 1783699 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || ||||| ||| ||||| || || || ||||| | ||||||| |||| Sbjct 1783698 GGTATTCCTTCTAAACTAAATTGACCAAGTAACTTGTTATCAACTGCCAATTTTCTTTCA 1783639 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||| | | || ||||| | |||||||||||| ||||| ||| || | Sbjct 1783638 CCCTGATGCACCTTAATTGTAACAGCTGTTTGATTATCTTCTGCAGTTGAAAACACCTGG 1783579 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA--CCACCTG 517511 ||||||||| ||||| || || || | |||||| | ||| |||| || ||| Sbjct 1783578 GATTTTTTAGTGGGAATAGTAGTATTACGTTCAATA--AGTGGAGTGAATACTCCTCCTA 1783521 Query 517512 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 517571 ||||| | |||||||||||| ||||| || |||| ||| | | || | || Sbjct 1783520 GAGTTTCAATACCAAGAGAAAGTGGAGTCACGTCAAGTAGTAACACAT------CTCTTA 1783467 Query 517572 CATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 517631 ||||| ||| || || |||| || || ||||| ||| ||| ||| |||||| Sbjct 1783466 CATCACCTTG------AATGATCCCTGCCTGTATTGCAGCTCCAATTGCTACAACTTCAT 1783413 Query 517632 CAGGATTAAC 517641 ||||||| || Sbjct 1783412 CAGGATTGAC 1783403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780718389575776