Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 129 7e-25 >seq1 Length=2798100 Score = 129 bits (142), Expect = 7e-25 Identities = 235/336 (70%), Gaps = 15/336 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||||||||||| || ||||| || |||||||| ||||| || | | Sbjct 659177 ATCAAAATCTTCACCACCCAGATGAGTATCACCGTTTGTCGCTTTCACTTC---GAAAAC 659233 Query 7516 TCCTTCA---ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 ||| ||| || | | | ||||| ||||| ||||||||||| || ||| | | Sbjct 659234 TCCATCACCTATTTCAAGTATTGAAACGTCAAATGTACCACCACCAAGATCATA---CAC 659290 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 ||| | || | ||| | | || ||||| ||||| || || | || || || ||||| Sbjct 659291 TACTATTGTGT-GTC--CGTGCTTTTTATCAAGACCATAAGCAAGTGCTGCAGCAGTTGG 659347 Query 7633 TTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 ||| ||||| || | || ||| || | |||||||| || | |||||||| || |||| Sbjct 659348 TTCGTTAATTATCCTGAGCACA-TTTAATCCAGCAATTTTTCCTGCATCTTTTGTTGCTT 659406 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | ||||| ||||| || ||||| || || || |||| || || || | |||| | | Sbjct 659407 GACGTTGAGAATCATTGAAGTATGCTGGCACTGTTATCACAGCATCTTTTACTTCCCCTC 659466 Query 7752 CGAGATACGATTCCGCGATATCTTTCAT-TTTGGTA 7786 | ||||| | ||| || |||||||| ||| ||| Sbjct 659467 CAAGATAAGCTTCTGCTGCCTCTTTCATGTTTTGTA 659502 Score = 129 bits (142), Expect = 7e-25 Identities = 235/336 (70%), Gaps = 15/336 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||||||||||| || ||||| || |||||||| ||||| || | | Sbjct 1783009 ATCAAAATCTTCACCACCCAGATGAGTATCACCGTTTGTCGCTTTCACTTC---GAAAAC 1782953 Query 7516 TCCTTCA---ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 ||| ||| || | | | ||||| ||||| ||||||||||| || ||| | | Sbjct 1782952 TCCATCACCTATTTCAAGTATTGAAACGTCAAATGTACCACCACCAAGATCATA---CAC 1782896 Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 ||| | || | ||| | | || ||||| ||||| || || | || || || ||||| Sbjct 1782895 TACTATTGTGT-GTC--CGTGCTTTTTATCAAGACCATAAGCAAGTGCTGCAGCAGTTGG 1782839 Query 7633 TTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 ||| ||||| || | || ||| || | |||||||| || | |||||||| || |||| Sbjct 1782838 TTCGTTAATTATCCTGAGCACA-TTTAATCCAGCAATTTTTCCTGCATCTTTTGTTGCTT 1782780 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | ||||| ||||| || ||||| || || || |||| || || || | |||| | | Sbjct 1782779 GACGTTGAGAATCATTGAAGTATGCTGGCACTGTTATCACAGCATCTTTTACTTCCCCTC 1782720 Query 7752 CGAGATACGATTCCGCGATATCTTTCAT-TTTGGTA 7786 | ||||| | ||| || |||||||| ||| ||| Sbjct 1782719 CAAGATAAGCTTCTGCTGCCTCTTTCATGTTTTGTA 1782684 Score = 118 bits (130), Expect = 1e-21 Identities = 196/283 (69%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 6704 ATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCT 6763 || ||||||||||| | ||| || | || | ||||||||| || | ||| || | Sbjct 658428 ATTCCATTTGCATCTATATCAAATGTCACTTCAATTTGTGGAACTCCACGCGGAGCAGGA 658487 Query 6764 GGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCA 6823 || || || |||| |||| ||||||||| ||||||| ||| || | |||| Sbjct 658488 GGTATTCCTTCTAAACTAAATTGACCAAGTAACTTGTTATCAACTGCCAATTTTCTTTCA 658547 Query 6824 CCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGT 6883 || | || || |||||||| || || | ||||||||||| ||| ||||| || | || Sbjct 658548 CCCTGATGCACCTTAATTGTAACAGCTGTTTGATTATCTTCTGCAGTTGAAAACACCTGG 658607 Query 6884 TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATA 6943 ||| |||| ||||| || ||||| | ||||| || || | | || || | | Sbjct 658608 GATTTTTTAGTGGGAATAGTAGTATTACGTTCAATAAGTGGAGTGAATACTCCTCCTAGA 658667 Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 ||||| | |||||||| || || |||||||| | ||||||| Sbjct 658668 GTTTCAATACCAAGAGAAAGTGGAGTCACGTCAAGTAGTAACA 658710 Score = 118 bits (130), Expect = 1e-21 Identities = 196/283 (69%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 6704 ATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCT 6763 || ||||||||||| | ||| || | || | ||||||||| || | ||| || | Sbjct 1783758 ATTCCATTTGCATCTATATCAAATGTCACTTCAATTTGTGGAACTCCACGCGGAGCAGGA 1783699 Query 6764 GGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCA 6823 || || || |||| |||| ||||||||| ||||||| ||| || | |||| Sbjct 1783698 GGTATTCCTTCTAAACTAAATTGACCAAGTAACTTGTTATCAACTGCCAATTTTCTTTCA 1783639 Query 6824 CCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGT 6883 || | || || |||||||| || || | ||||||||||| ||| ||||| || | || Sbjct 1783638 CCCTGATGCACCTTAATTGTAACAGCTGTTTGATTATCTTCTGCAGTTGAAAACACCTGG 1783579 Query 6884 TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATA 6943 ||| |||| ||||| || ||||| | ||||| || || | | || || | | Sbjct 1783578 GATTTTTTAGTGGGAATAGTAGTATTACGTTCAATAAGTGGAGTGAATACTCCTCCTAGA 1783519 Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 ||||| | |||||||| || || |||||||| | ||||||| Sbjct 1783518 GTTTCAATACCAAGAGAAAGTGGAGTCACGTCAAGTAGTAACA 1783476 Score = 111 bits (122), Expect = 2e-19 Identities = 371/557 (67%), Gaps = 34/557 (6%) Strand=Plus/Plus Query 11232 TATTTCTTCACGTCCGTGAACATCAGGTAAAGAAACTTGTATTTTA-CGATCAAATCTAC 11290 |||| |||||| || | | |||||||||||||| | ||| | | || ||||| | || Sbjct 1108310 TATTCTTTCACGCCCATTGATATCAGGTAAAGAAA-TAGTAATCTGTCGGTCAAAACGAC 1108368 Query 11291 CGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACCTATAACAACAA 11350 | || | | || || || || | ||| |||||| |||||| | ||| | | Sbjct 1108369 CAGGTCTAAGTAGTGCTGGATCTAGCACATCTGGACGGTTAGTTGCAGC---AACTATTA 1108425 Query 11351 TTTCAGTTTCATT---CTCGAAACCATCCATTTCTGTTAATAATTGGTTAATTGTTTGTT 11407 | || |||||| |||||| ||||||||||| || ||| || || | |||||||| Sbjct 1108426 TCACACCTTCATTAGACTCGAAGCCATCCATTTCAACTAGTAACTGATTTAATGTTTGTT 1108485 Query 11408 CACGCTCATCGTTTGCCGCAAACCCATTC--ATACTTCTTTTCTTACCAATCGCATCAAT 11465 | | || ||||| |||| | || | | || | | | | |||| | ||||| || Sbjct 1108486 CCCTTTCGTCGTTA-CCGCCA-CCAAGACCAATGCCGCGATGCCTACCCACTGCATCTAT 1108543 Query 11466 TTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT-TCAAATATATCACGGA 11524 ||| ||||| || || || || || ||||| | |||| | ||| |||||||| | Sbjct 1108544 TTCGTCTATGAAAATTATGCAAGGAGCATTTTT-CTTGCCTTGATAAAACATATCACGTA 1108602 Query 11525 CTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCCCG-AACACTGAATA 11583 | | |||| || | || |||||||||||||| || ||||| | || ||| || | Sbjct 1108603 CACGGCTTGCACCAATACCGACAAACATTTCAACAAAATCAGACCCGGAAATACT-AAAA 1108661 Query 11584 AAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTGTACCTGGT 11643 || || || || |||||| || || ||||| || | || |||||||| || || || Sbjct 1108662 AATGGTACATTAGCTTCACCTGCAATTGCACGAGCAAGTAGGGTTTTACCGGTTCCAGGG 1108721 Query 11644 TTACCTGTTAATAATGCA-CCCCTTGGTATTTTAGCACCGGTACCAAAGTACTT----TT 11698 ||| |||| || || || ||||||| || ||| |||| || || || Sbjct 1108722 GAACCAATTAA-AAGACATCCTTTTGGTATCTT---TCCG--CCCAA--TATTTGAAATT 1108773 Query 11699 CTGGCGCCTTG----AGAAAATCAACAATTTCTTCGAGCTCATCTTTCGCGCTATCTATA 11754 | || | ||| ||||||||||| || || | | ||| ||||| || ||| || Sbjct 1108774 TTTGC-CTTTGTTTAAGAAAATCAACGATCTCAACTAACTCTTCTTTTGCTTCATCAATT 1108832 Query 11755 CCCTGAACATCATCAAA 11771 || |||||||||||| Sbjct 1108833 CCGGCAACATCATCAAA 1108849 Score = 111 bits (122), Expect = 2e-19 Identities = 371/557 (67%), Gaps = 34/557 (6%) Strand=Plus/Minus Query 11232 TATTTCTTCACGTCCGTGAACATCAGGTAAAGAAACTTGTATTTTA-CGATCAAATCTAC 11290 |||| |||||| || | | |||||||||||||| | ||| | | || ||||| | || Sbjct 2136352 TATTCTTTCACGCCCATTGATATCAGGTAAAGAAA-TAGTAATCTGTCGGTCAAAACGAC 2136294 Query 11291 CGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACCTATAACAACAA 11350 | || | | || || || || | ||| |||||| |||||| | ||| | | Sbjct 2136293 CAGGTCTAAGTAGTGCTGGATCTAGCACATCTGGACGGTTAGTTGCAGC---AACTATTA 2136237 Query 11351 TTTCAGTTTCATT---CTCGAAACCATCCATTTCTGTTAATAATTGGTTAATTGTTTGTT 11407 | || |||||| |||||| ||||||||||| || ||| || || | |||||||| Sbjct 2136236 TCACACCTTCATTAGACTCGAAGCCATCCATTTCAACTAGTAACTGATTTAATGTTTGTT 2136177 Query 11408 CACGCTCATCGTTTGCCGCAAACCCATTC--ATACTTCTTTTCTTACCAATCGCATCAAT 11465 | | || ||||| |||| | || | | || | | | | |||| | ||||| || Sbjct 2136176 CCCTTTCGTCGTTA-CCGCCA-CCAAGACCAATGCCGCGATGCCTACCCACTGCATCTAT 2136119 Query 11466 TTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT-TCAAATATATCACGGA 11524 ||| ||||| || || || || || ||||| | |||| | ||| |||||||| | Sbjct 2136118 TTCGTCTATGAAAATTATGCAAGGAGCATTTTT-CTTGCCTTGATAAAACATATCACGTA 2136060 Query 11525 CTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCCCG-AACACTGAATA 11583 | | |||| || | || |||||||||||||| || ||||| | || ||| || | Sbjct 2136059 CACGGCTTGCACCAATACCGACAAACATTTCAACAAAATCAGACCCGGAAATACT-AAAA 2136001 Query 11584 AAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTGTACCTGGT 11643 || || || || |||||| || || ||||| || | || |||||||| || || || Sbjct 2136000 AATGGTACATTAGCTTCACCTGCAATTGCACGAGCAAGTAGGGTTTTACCGGTTCCAGGG 2135941 Query 11644 TTACCTGTTAATAATGCA-CCCCTTGGTATTTTAGCACCGGTACCAAAGTACTT----TT 11698 ||| |||| || || || ||||||| || ||| |||| || || || Sbjct 2135940 GAACCAATTAA-AAGACATCCTTTTGGTATCTT---TCCG--CCCAA--TATTTGAAATT 2135889 Query 11699 CTGGCGCCTTG----AGAAAATCAACAATTTCTTCGAGCTCATCTTTCGCGCTATCTATA 11754 | || | ||| ||||||||||| || || | | ||| ||||| || ||| || Sbjct 2135888 TTTGC-CTTTGTTTAAGAAAATCAACGATCTCAACTAACTCTTCTTTTGCTTCATCAATT 2135830 Query 11755 CCCTGAACATCATCAAA 11771 || |||||||||||| Sbjct 2135829 CCGGCAACATCATCAAA 2135813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635116159520640