Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 163 2e-34 >seq1 Length=2798100 Score = 163 bits (180), Expect = 2e-34 Identities = 259/371 (70%), Gaps = 18/371 (5%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || ||||||||||||| ||| ||| ||||||||| | || |||| || | |||| Sbjct 658783 GTCAATCCTGATGAAGTTGTAGCAATTGGAGCTGCAATACAGGCAGGGATCATTCAAGGT 658724 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 || | ||| || | |||| ||||||| ||||||||||| | ||| Sbjct 658723 ------GATG------TAAGAGATGTGTTACTACTTGACGTGACTCCACTTTCTCTTGGT 658676 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| | ||||| | | ||| |||||||| | |||||| |||| || Sbjct 658675 ATTGAAACTCTAGGAGGAGTATTCACTCCACTTATTGAACGTAATACTACTATTCCCACT 658616 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 |||||||| | || ||||| ||| |||||||||||| |||| || || | | Sbjct 658615 AAAAAATCCCAGGTGTTTTCAACTGCAGAAGATAATCAAACAGCTGTTACAATTAAGGTG 658556 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAA---ACTTGGAACTTTTAATCTT 476086 | | |||||||||||||| | || | ||||||| |||||| |||| | | Sbjct 658555 CATCAGGGTGAAAGAAAATTGGC---AGTTGATAACAAGTTACTTGGTCAATTTAGTTTA 658499 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 ||||| || ||||||||||| | |||||||| ||||||||||| || |||||||| ||| Sbjct 658498 GAAGGAATACCTCCTGCTCCGCGTGGAGTTCCACAAATTGAAGTGACATTTGATATAGAT 658439 Query 476147 GCAAATGGTAT 476157 |||||||| || Sbjct 658438 GCAAATGGAAT 658428 Score = 163 bits (180), Expect = 2e-34 Identities = 259/371 (70%), Gaps = 18/371 (5%) Strand=Plus/Plus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || ||||||||||||| ||| ||| ||||||||| | || |||| || | |||| Sbjct 1783403 GTCAATCCTGATGAAGTTGTAGCAATTGGAGCTGCAATACAGGCAGGGATCATTCAAGGT 1783462 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 || | ||| || | |||| ||||||| ||||||||||| | ||| Sbjct 1783463 ------GATG------TAAGAGATGTGTTACTACTTGACGTGACTCCACTTTCTCTTGGT 1783510 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| | ||||| | | ||| |||||||| | |||||| |||| || Sbjct 1783511 ATTGAAACTCTAGGAGGAGTATTCACTCCACTTATTGAACGTAATACTACTATTCCCACT 1783570 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 |||||||| | || ||||| ||| |||||||||||| |||| || || | | Sbjct 1783571 AAAAAATCCCAGGTGTTTTCAACTGCAGAAGATAATCAAACAGCTGTTACAATTAAGGTG 1783630 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAA---ACTTGGAACTTTTAATCTT 476086 | | |||||||||||||| | || | ||||||| |||||| |||| | | Sbjct 1783631 CATCAGGGTGAAAGAAAATTGGC---AGTTGATAACAAGTTACTTGGTCAATTTAGTTTA 1783687 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 ||||| || ||||||||||| | |||||||| ||||||||||| || |||||||| ||| Sbjct 1783688 GAAGGAATACCTCCTGCTCCGCGTGGAGTTCCACAAATTGAAGTGACATTTGATATAGAT 1783747 Query 476147 GCAAATGGTAT 476157 |||||||| || Sbjct 1783748 GCAAATGGAAT 1783758 Score = 161 bits (178), Expect = 6e-34 Identities = 134/164 (82%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 474713 TATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCT 474772 ||||||||| ||||||| ||||| || || || || |||||||| || ||||||||| Sbjct 659473 TATCTTGGAGGGGAAGTAAAAGATGCTGTGATAACAGTGCCAGCATACTTCAATGATTCT 659414 Query 474773 CAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATT 474832 |||||||||||||| |||||||| |||| |||||| || | ||||| | | || ||| Sbjct 659413 CAACGTCAAGCAACAAAAGATGCAGGAAAAATTGCTGGATTAAATGTGCTCAGGATAATT 659354 Query 474833 AATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || |||||||| || || ||||||||||||||||||||||| || Sbjct 659353 AACGAACCAACTGCTGCAGCACTTGCTTATGGTCTTGATAAAAA 659310 Score = 161 bits (178), Expect = 6e-34 Identities = 134/164 (82%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 474713 TATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCT 474772 ||||||||| ||||||| ||||| || || || || |||||||| || ||||||||| Sbjct 1782713 TATCTTGGAGGGGAAGTAAAAGATGCTGTGATAACAGTGCCAGCATACTTCAATGATTCT 1782772 Query 474773 CAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATT 474832 |||||||||||||| |||||||| |||| |||||| || | ||||| | | || ||| Sbjct 1782773 CAACGTCAAGCAACAAAAGATGCAGGAAAAATTGCTGGATTAAATGTGCTCAGGATAATT 1782832 Query 474833 AATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || |||||||| || || ||||||||||||||||||||||| || Sbjct 1782833 AACGAACCAACTGCTGCAGCACTTGCTTATGGTCTTGATAAAAA 1782876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268089292390208