Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 156 6e-33 >seq1 Length=2798100 Score = 156 bits (172), Expect = 6e-33 Identities = 237/330 (72%), Gaps = 12/330 (4%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTT-TCATGG-GTAAAACTGTGAAAGATGCAGTTGTGA 195719 || ||||| ||| | || ||| ||| || ||| | || || |||||||| || | | Sbjct 659497 AACATGAAAGAGGCAGCAGAAGCTTATCTTGGAGGGGAA--GTAAAAGATGCTGTGATAA 659440 Query 195720 CTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTG 195779 | || || || ||||||| |||||| ||||| || || ||||| || || | |||| Sbjct 659439 CAGTGCCAGCATACTTCAATGATTCTCAACGTCAAGCAACAAAAGATGCAGGAAAAATTG 659380 Query 195780 CGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | || |||| ||| || || || || || |||||||| || || ||| ||||||||||| Sbjct 659379 CTGGATTAAA-TGTGCTCAGGATAATTAACGAACCAACTGCTGCAGCACTTGCTTATGGT 659321 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 || || || || | ||| | | | || ||| || | |||||| ||||||||||| Sbjct 659320 CTTGATAAAAA---GCACGGACACACAATAGTAGTG---TATGATCTTGGTGGTGGTACA 659267 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 ||||| || ||| | || | || | | ||| | |||||||| || || || ||| Sbjct 659266 TTTGACGTTTCAATACTTGAAATAGGTGATGGAGTTTTCGAAGTGAAAGCGACAAACGGT 659207 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||||||||| |||||||||||||| ||| Sbjct 659206 GATACTCATCTGGGTGGTGAAGATTTTGAT 659177 Score = 156 bits (172), Expect = 6e-33 Identities = 237/330 (72%), Gaps = 12/330 (4%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTT-TCATGG-GTAAAACTGTGAAAGATGCAGTTGTGA 195719 || ||||| ||| | || ||| ||| || ||| | || || |||||||| || | | Sbjct 1782689 AACATGAAAGAGGCAGCAGAAGCTTATCTTGGAGGGGAA--GTAAAAGATGCTGTGATAA 1782746 Query 195720 CTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTG 195779 | || || || ||||||| |||||| ||||| || || ||||| || || | |||| Sbjct 1782747 CAGTGCCAGCATACTTCAATGATTCTCAACGTCAAGCAACAAAAGATGCAGGAAAAATTG 1782806 Query 195780 CGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | || |||| ||| || || || || || |||||||| || || ||| ||||||||||| Sbjct 1782807 CTGGATTAAA-TGTGCTCAGGATAATTAACGAACCAACTGCTGCAGCACTTGCTTATGGT 1782865 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 || | | || ||| ||| | | | || ||| || | |||||| ||||||||||| Sbjct 1782866 CTTG---ATAAAAAGCACGGACACACAATAGTAGTG---TATGATCTTGGTGGTGGTACA 1782919 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 ||||| || ||| | || | || | | ||| | |||||||| || || || ||| Sbjct 1782920 TTTGACGTTTCAATACTTGAAATAGGTGATGGAGTTTTCGAAGTGAAAGCGACAAACGGT 1782979 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||||||||| |||||||||||||| ||| Sbjct 1782980 GATACTCATCTGGGTGGTGAAGATTTTGAT 1783009 Score = 86.0 bits (94), Expect = 8e-12 Identities = 153/219 (70%), Gaps = 17/219 (8%) Strand=Plus/Minus Query 59165 ACCGATAGTAATTACGTAAAACAGGGAATAACTTCATGGATTCACAATTGGAAGAAAAAT 59224 || |||||| | || | ||||| || ||||| ||||| |||| ||||| | |||| Sbjct 879063 ACTGATAGTCAGTATATTAAACAAGGTATAACAGAGTGGATCAACAAGTGGAAAATAAAT 879004 Query 59225 GGATGGAAAACTGCCAATGGTGGAAAC---GTAAAGAATAAAGAATTATGGGTTAAACTA 59281 || ||||| || || || | ||| |||||||| || ||||||||| || | Sbjct 879003 GGTTGGAAGACAGC---TGATAAAAAGCCAGTAAAGAACAAGGAATTATGGAAGGAATT- 878948 Query 59282 GACGAATTAAGGGATTATTT--CCTCATGAT--TGAATGGAAGTGGGTAAAGGCTCATAA 59337 |||| || ||||| | | |||||| | | ||||||||||| |||||||| | Sbjct 878947 ---GAATGAA---ATTATCTTGCAGCATGATATTAACTGGAAGTGGGTTAAGGCTCACAG 878894 Query 59338 TGGAAACCCCAAAAATGAAGAAGCTGATAAACTTGCCAG 59376 ||| || || | |||||||| || |||| |||||| || Sbjct 878893 TGGTAATACCTATAATGAAGAGGCAGATAGACTTGCTAG 878855 Score = 86.0 bits (94), Expect = 8e-12 Identities = 153/219 (70%), Gaps = 17/219 (8%) Strand=Plus/Plus Query 59165 ACCGATAGTAATTACGTAAAACAGGGAATAACTTCATGGATTCACAATTGGAAGAAAAAT 59224 || |||||| | || | ||||| || ||||| ||||| |||| ||||| | |||| Sbjct 1641598 ACTGATAGTCAGTATATTAAACAAGGTATAACAGAGTGGATCAACAAGTGGAAAATAAAT 1641657 Query 59225 GGATGGAAAACTGCCAATGGTGGAAAC---GTAAAGAATAAAGAATTATGGGTTAAACTA 59281 || ||||| || || || | ||| |||||||| || ||||||||| || | Sbjct 1641658 GGTTGGAAGACAGC---TGATAAAAAGCCAGTAAAGAACAAGGAATTATGGAAGGAATT- 1641713 Query 59282 GACGAATTAAGGGATTATTT--CCTCATGAT--TGAATGGAAGTGGGTAAAGGCTCATAA 59337 |||| || ||||| | | |||||| | | ||||||||||| |||||||| | Sbjct 1641714 ---GAATGAA---ATTATCTTGCAGCATGATATTAACTGGAAGTGGGTTAAGGCTCACAG 1641767 Query 59338 TGGAAACCCCAAAAATGAAGAAGCTGATAAACTTGCCAG 59376 ||| || || | |||||||| || |||| |||||| || Sbjct 1641768 TGGTAATACCTATAATGAAGAGGCAGATAGACTTGCTAG 1641806 Score = 86.0 bits (94), Expect = 8e-12 Identities = 153/219 (70%), Gaps = 17/219 (8%) Strand=Plus/Minus Query 59165 ACCGATAGTAATTACGTAAAACAGGGAATAACTTCATGGATTCACAATTGGAAGAAAAAT 59224 || |||||| | || | ||||| || ||||| ||||| |||| ||||| | |||| Sbjct 2329134 ACTGATAGTCAGTATATTAAACAAGGTATAACAGAGTGGATCAACAAGTGGAAAATAAAT 2329075 Query 59225 GGATGGAAAACTGCCAATGGTGGAAAC---GTAAAGAATAAAGAATTATGGGTTAAACTA 59281 || ||||| || || || | ||| |||||||| || ||||||||| || | Sbjct 2329074 GGTTGGAAGACAGC---TGATAAAAAGCCAGTAAAGAACAAGGAATTATGGAAGGAATT- 2329019 Query 59282 GACGAATTAAGGGATTATTT--CCTCATGAT--TGAATGGAAGTGGGTAAAGGCTCATAA 59337 |||| || ||||| | | |||||| | | ||||||||||| |||||||| | Sbjct 2329018 ---GAATGAA---ATTATCTTGCAGCATGATATTAACTGGAAGTGGGTTAAGGCTCACAG 2328965 Query 59338 TGGAAACCCCAAAAATGAAGAAGCTGATAAACTTGCCAG 59376 ||| || || | |||||||| || |||| |||||| || Sbjct 2328964 TGGTAATACCTATAATGAAGAGGCAGATAGACTTGCTAG 2328926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657845164005120