Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1815 91.5 3e-13 >seq1815 Length=6262 Score = 91.5 bits (100), Expect = 3e-13 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 296876 TTTATGAAAGAAAATAATTTAATATTAACAAATAATCAATATTTTATTGATATGTGGTTA 296935 || || ||| | |||||||||| ||| | || ||| |||||||| | || | || || Sbjct 1504 TTGATAAAAAATAATAATTTAAAATTTTCGAAAAATAAATATTTTTTAGAATTATGAATA 1563 Query 296936 CCTTTAAAAGATAAAA-AAGATATATTAATAACTAATAATTTATTAGAATTTATGGGATT 296994 || |||| |||||||| |||| || |||||||| || | ||||||||||||| | | || Sbjct 1564 CCGTTAAGAGATAAAATAAGAAATTTTAATAACCAAAATTTTATTAGAATTTTTAGAATA 1623 Query 296995 TGGAGATATAAATAA 297009 || | || |||||| Sbjct 1624 TGAACATGAAAATAA 1638 Score = 91.5 bits (100), Expect = 3e-13 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 10683 TTATTTATATCTCCAAATCCCATAAATTCTAATAAATTATTAGTTATTAATATATCTT-T 10741 |||||| || | || || | | ||||||||||||| | || |||||||| || |||| | Sbjct 1638 TTATTTTCATGTTCATATTCTAAAAATTCTAATAAAATTTTGGTTATTAAAATTTCTTAT 1579 Query 10742 TTTATCTTTTAAAGGTAACCACATATCAATAAAATATTGATTATTTGTTAATATTAAATT 10801 ||||||| |||| |||| || | || | |||||||| ||| || | ||| ||||||| Sbjct 1578 TTTATCTCTTAACGGTATTCATAATTCTAAAAAATATTTATTTTTCGAAAATTTTAAATT 1519 Query 10802 ATTTTCTTTCATAAA 10816 ||| | ||| || || Sbjct 1518 ATTATTTTTTATCAA 1504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984453561789600