Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1392 118 3e-21 >seq1392 Length=6431 Score = 118 bits (130), Expect = 3e-21 Identities = 233/342 (68%), Gaps = 6/342 (2%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||||||| || |||||| || ||||| | ||||||| || || ||||||||| Sbjct 834 TTTCTTACAGTTCCATCATAGTTAACCATAACGCTTTCCATAGCTTTTATCAAACGACGC 775 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 || || ||||||||| | ||||||||||| |||||||| | ||| ||||||||||| Sbjct 774 TGGATGTAACCAGTTTCCGCAGTTTTTACAGCAGTATCAATCAAACCTTCACGACCACCC 715 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 || |||||||| | | || ||| || || | | | || |||| || || Sbjct 714 ATGGCATGGAAATAAAATTCGGAAGGTGTCAGTCCTGCTAAGTATGAATTCTCTACAAAG 655 Query 302719 CCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCA 302775 || | | ||| || || |||| || || | || || |||| || || || | Sbjct 654 CCTCTAGACTCAGGACCGTAATCATC---TTTAATGAAATGAGGCAATGTTCTTTTTCGA 598 Query 302776 TAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGC 302835 | || |||| ||||| ||||| || || |||||||| |||| || | || | || Sbjct 597 AATCCAAATGGTATACGTTTTCCTTCTACATTCTGCTGACCCACACAAGCGATAACTTGA 538 Query 302836 GAAATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877 || ||||| | || |||||||| |||||| ||||||| Sbjct 537 GAGATATTAATATTTGATCCCTTGGACCCAGCAACTACCATA 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471778074338352