Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 181 8e-40 >seq1 Length=2798100 Score = 181 bits (200), Expect = 8e-40 Identities = 239/331 (72%), Gaps = 8/331 (2%) Strand=Plus/Plus Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 |||||||||||||||||| |||| | ||||| || || ||| | |||| ||||| Sbjct 659174 ATTATCAAAATCTTCACCACCCAGATGAGTATCACCGTTTGTCGCTTTCACTTCGAAAAC 659233 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 |||||| | | | | | ||| ||| || |||||||| | |||| | | | Sbjct 659234 TCCATCACCTATTTCAAGTATTGAAACGTCAAATGTACCACCACCAAGATCATACACTAC 659293 Query 282310 TACATTCATTTCTTTGTCT-TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 || || | |||| || ||||||||||||||||| |||| || |||||||||| Sbjct 659294 TA-------TTGTGTGTCCGTGCTTTTTATCAAGACCATAAGCAAGTGCTGCAGCAGTTG 659346 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 |||| ||||| || || | ||||| | ||||||||| ||||||||||||| || |||| Sbjct 659347 GTTCGTTAATTATCCTGAGCACATTTAATCCAGCAATTTTTCCTGCATCTTTTGTTGCTT 659406 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488 | | ||| ||||| || || ||||| || || || || || |||||| ||||||| || Sbjct 659407 GACGTTGAGAATCATTGAAGTATGCTGGCACTGTTATCACAGCATCTTTTACTTCCCCTC 659466 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 ||| |||||| ||||| | |||||| || Sbjct 659467 CAAGATAAGCTTCTGCTGCCTCTTTCATGTT 659497 Score = 181 bits (200), Expect = 8e-40 Identities = 239/331 (72%), Gaps = 8/331 (2%) Strand=Plus/Minus Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 |||||||||||||||||| |||| | ||||| || || ||| | |||| ||||| Sbjct 1783012 ATTATCAAAATCTTCACCACCCAGATGAGTATCACCGTTTGTCGCTTTCACTTCGAAAAC 1782953 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 |||||| | | | | | ||| ||| || |||||||| | |||| | | | Sbjct 1782952 TCCATCACCTATTTCAAGTATTGAAACGTCAAATGTACCACCACCAAGATCATACACTAC 1782893 Query 282310 TACATTCATTTCTTTGTCT-TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 || || | |||| || ||||||||||||||||| |||| || |||||||||| Sbjct 1782892 TA-------TTGTGTGTCCGTGCTTTTTATCAAGACCATAAGCAAGTGCTGCAGCAGTTG 1782840 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 |||| ||||| || || | ||||| | ||||||||| ||||||||||||| || |||| Sbjct 1782839 GTTCGTTAATTATCCTGAGCACATTTAATCCAGCAATTTTTCCTGCATCTTTTGTTGCTT 1782780 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488 | | ||| ||||| || || ||||| || || || || || |||||| ||||||| || Sbjct 1782779 GACGTTGAGAATCATTGAAGTATGCTGGCACTGTTATCACAGCATCTTTTACTTCCCCTC 1782720 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 ||| |||||| ||||| | |||||| || Sbjct 1782719 CAAGATAAGCTTCTGCTGCCTCTTTCATGTT 1782689 Score = 132 bits (146), Expect = 4e-25 Identities = 252/370 (68%), Gaps = 16/370 (4%) Strand=Plus/Plus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || ||||| ||||| | ||||||||| ||||||||||| || || || | | ||||||| Sbjct 658428 ATTCCATTTGCATCTATATCAAATGTCACTTCAATTTGTGGAACTCCACGCGGAGCAGGA 658487 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || ||||| ||| ||||| || || || ||||| | ||||||| |||| Sbjct 658488 GGTATTCCTTCTAAACTAAATTGACCAAGTAACTTGTTATCAACTGCCAATTTTCTTTCA 658547 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 |||| | | || ||||| | |||||||||||| ||||| ||| || | Sbjct 658548 CCCTGATGCACCTTAATTGTAACAGCTGTTTGATTATCTTCTGCAGTTGAAAACACCTGG 658607 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA--CCACCAG 281678 ||||||||| ||||| || || || | |||||| | ||| |||| || || Sbjct 658608 GATTTTTTAGTGGGAATAGTAGTATTACGTTCAATA--AGTGGAGTGAATACTCCTCCTA 658665 Query 281679 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 281738 ||||| | |||||||||||| ||||| || |||| ||| | | || | || Sbjct 658666 GAGTTTCAATACCAAGAGAAAGTGGAGTCACGTCAAGTAGTAACACAT------CTCTTA 658719 Query 281739 CATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 281798 ||||| ||| || || |||| || || ||||| ||| ||| ||| |||||| Sbjct 658720 CATCACCTTG------AATGATCCCTGCCTGTATTGCAGCTCCAATTGCTACAACTTCAT 658773 Query 281799 CAGGATTAAC 281808 ||||||| || Sbjct 658774 CAGGATTGAC 658783 Score = 132 bits (146), Expect = 4e-25 Identities = 252/370 (68%), Gaps = 16/370 (4%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || ||||| ||||| | ||||||||| ||||||||||| || || || | | ||||||| Sbjct 1783758 ATTCCATTTGCATCTATATCAAATGTCACTTCAATTTGTGGAACTCCACGCGGAGCAGGA 1783699 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || ||||| ||| ||||| || || || ||||| | ||||||| |||| Sbjct 1783698 GGTATTCCTTCTAAACTAAATTGACCAAGTAACTTGTTATCAACTGCCAATTTTCTTTCA 1783639 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 |||| | | || ||||| | |||||||||||| ||||| ||| || | Sbjct 1783638 CCCTGATGCACCTTAATTGTAACAGCTGTTTGATTATCTTCTGCAGTTGAAAACACCTGG 1783579 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA--CCACCAG 281678 ||||||||| ||||| || || || | |||||| | ||| |||| || || Sbjct 1783578 GATTTTTTAGTGGGAATAGTAGTATTACGTTCAATA--AGTGGAGTGAATACTCCTCCTA 1783521 Query 281679 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 281738 ||||| | |||||||||||| ||||| || |||| ||| | | || | || Sbjct 1783520 GAGTTTCAATACCAAGAGAAAGTGGAGTCACGTCAAGTAGTAACACAT------CTCTTA 1783467 Query 281739 CATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 281798 ||||| ||| || || |||| || || ||||| ||| ||| ||| |||||| Sbjct 1783466 CATCACCTTG------AATGATCCCTGCCTGTATTGCAGCTCCAATTGCTACAACTTCAT 1783413 Query 281799 CAGGATTAAC 281808 ||||||| || Sbjct 1783412 CAGGATTGAC 1783403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740527495257696