Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Armadillidium_20vulgare_20[genbank_20GCA_5F001887335.1_202016-11-29] 2,096 sequences; 15,703,284 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq1 228 3e-54 seq2 89.7 2e-12 >seq1 Length=2798100 Score = 228 bits (252), Expect = 3e-54 Identities = 302/419 (72%), Gaps = 0/419 (0%) Strand=Plus/Minus Query 188779 GGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTA 188838 ||||| |||||||| ||||| || || | | ||||| | ||| | | | | | || Sbjct 181307 GGCCCCACTGGTTCTGGTAAGACTTTGCTAGTCAAAACACTTGCTAAAGTTTCAGACGTG 181248 Query 188839 CCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTG 188898 || | ||||| ||||||| || |||| || || || |||||||||||||| ||||| Sbjct 181247 CCATTTGCTATGGCTGATGCGACAACTTTGACTGAGGCAGGTTATGTAGGTGATGATGTA 181188 Query 188899 GAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGT 188958 |||| || ||| |||||| | || || || ||||||| | | | ||| | | Sbjct 181187 GAAAGTGTGTTGTCACGTTTATTGCAGGCTGCAAATTACGACGTTGCAAAAGCACAGTGC 181128 Query 188959 GGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATT 189018 || || || | |||||||||| |||| || || | || ||||| |||||| | || || Sbjct 181127 GGTATAGTGTTTATCGATGAAATAGACAAGATCACAAGGAAATCTGAAAGCTCTTCAATA 181068 Query 189019 ACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACA 189078 ||||| ||||| || || ||||| |||||||||||| || | ||||| || |||| |||| Sbjct 181067 ACCCGTGATGTTTCAGGTGAAGGGGTACAGCAAGCTCTACTTAAAATTATGGAAGATACA 181008 Query 189079 GTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATA 189138 ||||| | ||||| || ||||| || || ||||| || || ||||| | | || || Sbjct 181007 GTTGCTTATGTTCCGCCACAAGGAGGGCGAAAACATCCACAACAAGAGTTTATACAAGTA 180948 Query 189139 GATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTAT 189197 || || | ||| || |||||||| ||| ||||| ||||| || || || || ||||| Sbjct 180947 GACACTAGTAACATACTGTTTATTTGTGGAGGAGCTTTTGAGGGCCTCGATAAAATTAT 180889 Score = 228 bits (252), Expect = 3e-54 Identities = 302/419 (72%), Gaps = 0/419 (0%) Strand=Plus/Plus Query 188779 GGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTA 188838 ||||| |||||||| ||||| || || | | ||||| | ||| | | | | | || Sbjct 1249881 GGCCCCACTGGTTCTGGTAAGACTTTGCTAGTCAAAACACTTGCTAAAGTTTCAGACGTG 1249940 Query 188839 CCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTG 188898 || | ||||| ||||||| || |||| || || || |||||||||||||| ||||| Sbjct 1249941 CCATTTGCTATGGCTGATGCGACAACTTTGACTGAGGCAGGTTATGTAGGTGATGATGTA 1250000 Query 188899 GAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGT 188958 |||| || ||| |||||| | || || || ||||||| | | | ||| | | Sbjct 1250001 GAAAGTGTGTTGTCACGTTTATTGCAGGCTGCAAATTACGACGTTGCAAAAGCACAGTGC 1250060 Query 188959 GGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATT 189018 || || || | |||||||||| |||| || || | || ||||| |||||| | || || Sbjct 1250061 GGTATAGTGTTTATCGATGAAATAGACAAGATCACAAGGAAATCTGAAAGCTCTTCAATA 1250120 Query 189019 ACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACA 189078 ||||| ||||| || || ||||| |||||||||||| || | ||||| || |||| |||| Sbjct 1250121 ACCCGTGATGTTTCAGGTGAAGGGGTACAGCAAGCTCTACTTAAAATTATGGAAGATACA 1250180 Query 189079 GTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATA 189138 ||||| | ||||| || ||||| || || ||||| || || ||||| | | || || Sbjct 1250181 GTTGCTTATGTTCCGCCACAAGGAGGGCGAAAACATCCACAACAAGAGTTTATACAAGTA 1250240 Query 189139 GATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTAT 189197 || || | ||| || |||||||| ||| ||||| ||||| || || || || ||||| Sbjct 1250241 GACACTAGTAACATACTGTTTATTTGTGGAGGAGCTTTTGAGGGCCTCGATAAAATTAT 1250299 >seq2 Length=106076 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 403938 TGTGCGCCTGTAGCTCAGCTGGATAGAGCACGAGCCTTCTAAGCCCGCGGTCGTAGGTTC 403997 |||| ||| ||||||||| ||||||||||| |||||||||||| |||||||||||| Sbjct 95681 TGTGTGCCCGTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTAGGTTC 95622 Query 403998 GAATCCTACCAGGC 404011 |||||||||| ||| Sbjct 95621 GAATCCTACCGGGC 95608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591867649246208