Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 >seq2 Length=4278185 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/214 (71%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 ||| ||| ||||| || || | || |||||| || ||||| || |||||||||||||| | Sbjct 2654793 TCAAGCCTGTGACATGTGCCAACATATACGTGAGAAGGGCATAACTGGCGATGTTAAATG 2654852 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTC--TGGTACAGCTGGCAGGACAGCTCCCCCCG 21106 | || || || |||||||| || || || || ||||| || || | ||| || | Sbjct 2654853 GCACTCCAAGACCCATGTCTGC--ACTTCGTTGATACAGTAAACAAGATAACTCTCCACT 2654910 Query 21107 AGCCACGTAAAACTGACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCG 21165 ||| || || || || ||| || | ||| || || || ||||||||| | | || Sbjct 2654911 AGCTACATAGAATTG-CACCAAGCAGTGGCAGGGTGGTAGAGCCATCTTAGGAATATCAA 2654969 Query 21166 CGGGGTTCCACGCGCACATAACGATGCGCCGATC 21199 | || ||||| || ||||| | ||| || ||||| Sbjct 2654970 CAGGATTCCAGGCACACATCATGATACGTCGATC 2655003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427773278542560