Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq142 95.1 1e-14 >seq142 Length=137952 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 14144 GTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAA 14203 ||| |||||||| || | | ||||| || || || | ||||||||| ||||| || || Sbjct 57106 GTAGGTATCAATGAGAAGGGAGTACATCTCGGAATGGACGTTTTCCATGGCTATTTGGAA 57047 Query 14204 ACCATAAAAGCATCTAGCTTCCG-ACCATTGTACTTCC-GAGTAAAATCTTTCGGCCAAA 14261 ||||||||| |||| ||||||| || | |||||| || | ||||| ||| | | | Sbjct 57046 ACCATAAAAACATCGTGCTTCCGTTACAGT-AACTTCCTGACT-AAATCGCTCGACGAGA 56989 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321 || || || || || |||||| |||||||| || ||||| | | ||||||| | Sbjct 56988 TTCTCGTTGACAATTCCATCAGATGCTGCAAAGAAGGCCAAAACATGCGATATAAAGTGT 56929 Query 14322 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361 |||| | | || || | ||||| || ||||| |||| Sbjct 56928 CGCTCATTGTCTTTTAGCATCTTCCAGTCTGATAAGTCCT 56889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479724869774800