Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 8e-15 >seq2 Length=4278185 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 25754 TCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACC 25813 |||| | |||||||| ||||||| |||||| ||| || |||| ||||| || || | Sbjct 2655168 TCCCAGTGTAGTCTGTATTCATGTCTTTGTACTGTGCGCCAAAATGTCTCCATTGAAAGC 2655227 Query 25814 CGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGT 25873 | || || || |||| ||| || || || | | ||| || | ||||||||||| Sbjct 2655228 CATAGACTGGACCTAAGTCACCCTCGTCTCGATCAATAAAACCACATTTATCCAAAAATG 2655287 Query 25874 CTCTGGAACCATTGGCGTCCCAGATCTTTAC-CCCCTTCTCGGAGAGCTCTTTGGAGTTT 25932 ||| | || |||||||| |||||| || || || || || || | ||| ||| | | Sbjct 2655288 ATCTAGTACTATTGGCGTTCCAGATATTCACACCTCTGCT-GGCTAATTCTCTGGCATCT 2655346 Query 25933 GTGGACCCTCTGACGAACCACAGCAGCTC 25961 || || ||| ||| ||||||||| || || Sbjct 2655347 GTCGATCCTTTGATGAACCACAGAAGTTC 2655375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340135436087106