Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 >seq2 Length=4278185 Score = 111 bits (122), Expect = 2e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 7183 GCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGA 7242 || |||||||||||||||||||| ||||| | |||||||| ||||| || || |||| | Sbjct 2655203 GCGCCAAAATGTCTCCATTGAAAGCCATAGACTGGACCTAAGTCACCCTCGTCTCGATCA 2655262 Query 7243 TTAAATCCTAATCGATTTAAATTAGATTTTGATCCATAAGCATCCCAAATATGTACAGAt 7302 |||| || || || ||| ||| | | | || || | ||| |||| ||| | Sbjct 2655263 ATAAAACCACATTTATCCAAAAATGATCTAGTACTATTGGCGTTCCAGATATTCACACCT 2655322 Query 7303 ttttttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTCTACT 7362 | | | ||| | | | || ||| |||||||| | |||||| | ||||||||| || Sbjct 2655323 CTGCTGGCTAATTCTCTGGCATCTGTCGATCCTTTGATGAACCACAGAAGTTCTTCGACA 2655382 Query 7363 ATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAA 7403 | || |||||||||| | |||||||| ||||| || || Sbjct 2655383 ACACCTCGCCAAAACACAGTCTTTGTAGTCAATAACGGAAA 2655423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595868111935200