Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_006651.1 Length=19161 Score E Sequences producing significant alignments: (Bits) Value seq487 95.1 1e-15 seq483 91.5 2e-14 seq223 91.5 2e-14 >seq487 Length=329773 Score = 95.1 bits (104), Expect = 1e-15 Identities = 78/94 (83%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 3337 GTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATC-AAAAGGGGTCAGGGT 3395 |||||||| ||||||||||||||||| ||| | ||||| ||||| ||| |||||| || | Sbjct 309870 GTTTTTGAAAGGGTAGAAAAGGATGGAAAAGTGTCAGCGAAATCTAAAGGGGGTCGGGTT 309929 Query 3396 CAAAAATGGTTGATTTGGCGTGGAATGCCCCATA 3429 || || |||| ||||||| |||||| | ||||| Sbjct 309930 CAGAAGTGGTCGATTTGGTATGGAATACGCCATA 309963 >seq483 Length=960042 Score = 91.5 bits (100), Expect = 2e-14 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 3337 GTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTC 3396 |||||| | |||||||||||| |||| ||||| ||||| ||||| ||||||| || || Sbjct 379652 GTTTTTCAAAGGGTAGAAAAGTATGGAAAACTGTCAGCAAAATCTGAAGGGGTAGGGTTC 379711 Query 3397 AAAAATGGTTGATTTGGCGTGGAATGCCCCATA 3429 |||| |||| ||||||| || ||| ||||||| Sbjct 379712 AAAAGTGGTCGATTTGGTATGAAATACCCCATA 379744 >seq223 Length=3708094 Score = 91.5 bits (100), Expect = 2e-14 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 3337 GTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTC 3396 || ||||| |||||| |||||||| | ||| ||||||| |||| |||||||| || | Sbjct 389592 GTCTTTGAAAGGGTATAAAAGGATAGAAAAGTTTCAGCTGAATCTGAAGGGGTCTGGTTG 389651 Query 3397 AAAAATGGTTGATTTGGCGTGGAATGCCCCATA 3429 |||| |||| ||||||||||||||| |||| || Sbjct 389652 AAAAGTGGTCGATTTGGCGTGGAATACCCCCTA 389684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 61196430639064