Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_007029.1 Length=6307 Score E Sequences producing significant alignments: (Bits) Value seq79 80.6 1e-11 >seq79 Length=1978966 Score = 80.6 bits (88), Expect = 1e-11 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 5613 AAGATTTCCCATTTCAAATACACGTCAATTATATTACtttttttttAACTTTCTAATACT 5672 |||||| |||||| |||||||||| |||| ||| | |||||| || | ||| ||| Sbjct 380968 AAGATTGTCCATTTGAAATACACGTGAATTCAATTGTTGTTTTTTCAAACTGCTATAACT 380909 Query 5673 CAGCTGCGTTTTATGATATCGTCGCGGTTTTGATCGCAA 5711 | || || |||||||||||||| |||||||||| ||| Sbjct 380908 CTGCGGCATTTTATGATATCGTATTGGTTTTGATCTCAA 380870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20067082155368