Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_007041.1 Length=13279 Score E Sequences producing significant alignments: (Bits) Value seq112 104 2e-18 >seq112 Length=1786610 Score = 104 bits (114), Expect = 2e-18 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 4254 ACCCAGATAGGAAAGTACGACGGGCCCAGGCTTNNNNNNNNNNNNNNNNNACTATGTTGA 4313 ||||| | |||||||||| ||||||||| |||| ||||||| | Sbjct 214533 ACCCATACAGGAAAGTACCACGGGCCCAAGCTTGGCCCAGGCTTGGCCCAACTATGTCAA 214592 Query 4314 ACTCTGGACCAAGCTTGTAAGCCAGCCTTGTTCCAGCCTTGGTAGAAGTCTGGAATGATA 4373 ||||||| ||| ||||||||||||| |||| |||| | |||||||||||||||||||| Sbjct 214593 ACTCTGGGCCAGGCTTGTAAGCCAGGCTTGGCCCAGTTTAGGTAGAAGTCTGGAATGATA 214652 Query 4374 ACTGGGTGCCAAGCCTGGTTGCCA 4397 || | |||| || ||||| ||| Sbjct 214653 ACGATGGGCCAGGCTTGGTTACCA 214676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42374144244012