Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_015273.1 Length=32317 Score E Sequences producing significant alignments: (Bits) Value seq382 93.3 9e-15 >seq382 Length=5309 Score = 93.3 bits (102), Expect = 9e-15 Identities = 251/376 (67%), Gaps = 26/376 (7%) Strand=Plus/Plus Query 27791 GACTTTGCGGCCAGCGTTCA-CGGTAGTCCACTCGATCAACAAACCGTTTTTCTCGATCA 27849 ||| |||||||| || || | ||| || ||||| |||| | | |||| |||||| | Sbjct 4416 GACCTTGCGGCCCGCCTTGATCGGGAG-CCACTGAATCAGCCAGCCGTCTTTCTCTTGGA 4474 Query 27850 GCTCGGTCACGGCCGGCTCGATCACGCGCCGGCGCAGCTCTTTGAAGTTCGCGCGGTGAC 27909 | || ||||||| || ||||| | |||| || |||||||||| || Sbjct 4475 GTTCCTTCACGGCGGGTTCGATGATCTTGGTTCGCACCTTGGCGAAGTTCGCGGCCTGCT 4534 Query 27910 TCTCTTTCGCATCCATCGCGCGGTGAAATTCTTCGATGCTCGGCGTGTAGCGCCCTTTGC 27969 || | | |||||||||| | | ||| || |||||| | || | |||| | || Sbjct 4535 TCGCGGTGGCATCCATCGAGGCGCAAAAGTCCTCGATGGT----GTATTCCGCCGT--GC 4588 Query 27970 CCGCCCACGACTTGAAACAC-TCA-----TACAGGCGC---CACGAGTACGCCGAGCGCA 28020 ||| |||| ||| | | ||| | ||| || |||||||| ||||||||| Sbjct 4589 CCGTG---GACTGGAAGCGCGTCAGCAGCTCCAGCAGCTTCCACGAGTAGCCCGAGCGCA 4645 Query 28021 GCGCGGCCGTTTGCTTGAGCTTGTATGACGTGAATTG---TTGGCGCAGTCCGAACAGGT 28077 |||||| || ||||| |||| ||| | |||||| || || | || |||| ||||| Sbjct 4646 GCGCGGACGCTTGCTGTAGCTGGTAGGTCGTGAACTGCGCTTTG---AGGCCGAGCAGGT 4702 Query 28078 GCGGGACGACTTCATGCCACCAGTGCAGCTCTACCCATCCCTCGCCCTTGTGATACTCGG 28137 || | | || || ||||||| ||| || ||||| ||||| || | ||| |||| Sbjct 4703 GCCGAATGAGATCCGGCCACCATGCCAGTTCGACCCAGCCCTCCCCTTGGTGGTACTTCA 4762 Query 28138 CCTTGCCGACCCATCG 28153 || ||||||||| || Sbjct 4763 CCGAGCCGACCCAGCG 4778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103292159713756