Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq212 178 1e-38 seq223 176 4e-38 seq46 154 1e-31 seq481 123 2e-22 seq489 107 2e-17 seq187 107 2e-17 seq496 89.7 4e-12 seq2 86.0 5e-11 >seq212 Length=2700027 Score = 178 bits (196), Expect = 1e-38 Identities = 370/549 (67%), Gaps = 8/549 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || ||| | |||||||| || ||||| || |||||||| | || || Sbjct 1210547 GCAATCGGGATTGATCTGGGAACCACGTACTCCTGTGTAGGAGTTTGGCAGCAAGGAAAG 1210488 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || ||||| ||||||||||| || || || ||||| ||| || | ||||| Sbjct 1210487 GTCGAGATAATTGCAAATGATCAAGGGAATAGGACAACTCCTAGTTACGTGGCGTTCACA 1210428 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || |||||| | |||| |||||||| ||| |||| | || |||||| | || Sbjct 1210427 GATACTGAAAGACTCATTGGGGATGCAGCCAAAAATCAGGTTGCTTTAAATCCTGCGAAC 1210368 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | || ||||| || | || || || || ||||| ||||| | | | || | Sbjct 1210367 ACAGTATTCGATGCAAAGAGGTTGATCGGGCGACGTTTTGATGATCCCAAGATCCAAGAT 1210308 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC- 550290 |||||||| | ||||| |||| || | | | || || ||| | || | | Sbjct 1210307 GATATGAAACTCTGGCCCTTCCGCGTTATCGAAGAGGGAGGCAAGCCTAAAATCCAGGTA 1210248 Query 550291 ---TACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 ||| | || | || |||| ||| |||||| | || || ||||| || Sbjct 1210247 GAATAC-CGTGGTGAG---GTGAAACGATTCAACCCAGAAGAGATCAGTTCCATGGTCTT 1210192 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 | || ||||| | | || || ||| | || ||| || | | ||||||||| || Sbjct 1210191 GACTAAGATGAAGGAGATTGCTGAAGCATTTCTGGGACAAAAAATCAAGGATGCAGTTAT 1210132 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 || || |||||||| || ||||| || || | |||||||| || |||||||| ||| Sbjct 1210131 CACCGTTCCAGCATACTTCAATGATTCGCAGAGGCAAGCTACCAAGGATGCTGGGGCTAT 1210072 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||||| | ||||| || | ||||||||||||||||| ||||| || ||||||||||| Sbjct 1210071 AGCTGGGATCAATGTCCTGAGGATTATCAATGAACCTACAGCTGCGGCCCTTGCATATGG 1210012 Query 550528 ACTTGATAA 550536 || || || Sbjct 1210011 TCTCGACAA 1210003 >seq223 Length=3708094 Score = 176 bits (194), Expect = 4e-38 Identities = 454/684 (66%), Gaps = 6/684 (1%) Strand=Plus/Minus Query 551894 AGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTAC 551953 ||| ||||| ||||| || || |||||||| || || || || | ||||| || || Sbjct 2740308 AGCCCTTCGACGTCTCAGGACCGCTTGCGAGAGGGCGAAGAGAACACTTTCCTCATCAAC 2740249 Query 551954 TCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTC 552013 || ||| ||||| | |||||| | |||||||||||||| | | || | || | Sbjct 2740248 CCAGGCCAGCATTGAGATTGATTCACTCTTTGAGGGAATTGACTTCTACACCTCCATCAC 2740189 Query 552014 GAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGA 552073 || || || ||||| | || |||| || || | || ||||||| || || Sbjct 2740188 AAGAGCGCGTTTCGAAGAGCTGTGCGCTGACCTTTTCCGTGGCACCCTTGAACCCGTTGA 2740129 Query 552074 ACAAGTTT-TAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTG 552132 |||| | | ||| ||||||| || || ||| | | || || || || | || | Sbjct 2740128 G-AAGTCGCTCCGTGATGCAAAGATGGACAAGTCCCAGATCCACGACATCGTCTTAGTCG 2740070 Query 552133 GTGGATCTACAAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAA 552191 |||| || || | || || || |||| || | || | ||| || |||||| ||| Sbjct 2740069 GTGGTTCCACCCGTATCCCAAAGATTCAAAAACTCCTTCAAGACTTCTT-CAATGGAAAA 2740011 Query 552192 AAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCA 552251 || | || || |||| || || |||||||| ||||| ||||| || | ||||| Sbjct 2740010 GAACTCAACAAATCCATTAACCCTGACGAGGCTGTAGCCTACGGTGCAGCTGTACAAGCT 2739951 Query 552252 GCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACT 552311 |||||||| |||| | | ||| || ||||| | || | ||| | ||||| ||| Sbjct 2739950 GCTATTCTCCATGGAGATAAGTCTGAGGAAGTACAAGACCTTCTTCTTTTGGATGTCACT 2739891 Query 552312 CCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAAT 552371 || || || |||||| | ||||| | ||| ||| | ||||| ||| ||| | | ||| Sbjct 2739890 CCACTTTCACTTGGTATTGAAACGGCTGGTGGTGTCATGACAGCTCTCATCAAGCGTAAT 2739831 Query 552372 ACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCT 552431 || || ||||| ||| || ||| || | || || | || || || ||| | Sbjct 2739830 ACAACCATTCCCACCAAACAAACTCAGACCTTCACCACATACGCCGACAACCAGCCTGGT 2739771 Query 552432 GTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGT 552491 || || || | | ||||| ||| || | ||||| || || || | ||||| Sbjct 2739770 GTATTGATCCAGGTCTACGAAGGTGAACGAGCCATGACTAAGGACAACAACCTTCTTGGA 2739711 Query 552492 ACTTTT-AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTAC 552550 | || || |||| || ||||| |||||||| || || || || ||||||||||| || Sbjct 2739710 AAGTTCGAACTTAGT-GGAATTCCACCTGCTCCCCGAGGCGTTCCTCAAATTGAAGTAAC 2739652 Query 552551 TTTCGATATCGATGCCAATGGAAT 552574 || || |||||||||||||| || Sbjct 2739651 CTTTGACATCGATGCCAATGGTAT 2739628 Score = 116 bits (128), Expect = 3e-20 Identities = 246/359 (69%), Gaps = 6/359 (2%) Strand=Plus/Minus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||| ||||| || ||||| | | ||| | ||| || || || ||||| |||||| Sbjct 2740877 GATGCCAAACGATTGATTGGTCGTCGCTTTGAGGATCTAACCGTCCAAGCAGACATGAAG 2740818 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTC-ATGA 550299 |||||||| ||| | | || | || || ||||| | ||||||| ||| | | Sbjct 2740817 CATTGGCCCTTCAATGTCGTCAGTGACGGCGGTAAACCGAAAATTGAAG-TACAGTACAA 2740759 Query 550300 AGGATCTGTTAA-ACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGA 550358 |||| || || | ||| || ||| || | || ||||| | | || |||| Sbjct 2740758 AGGAGAATCGAAGACTTTCTTCCCC-GAAGAAGTGAGCTCAATGGTCCTGGTAAAGATGA 2740700 Query 550359 AACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCA 550417 | |||| ||| |||| | |||| ||||| || || |||| || || ||||| || Sbjct 2740699 AGGAAACTGCCGAAGCTTATCTTGG-CAAGACCGTCACCAATGCCGTGATCACTGTTCCT 2740641 Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477 || ||||| || |||||||||||||| || |||||||| | ||| || | || || Sbjct 2740640 GCTTATTTCAACGACTCACAACGTCAGGCAACTAAAGACTCGGGAACCATCTCAGGCCTG 2740581 Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || || || || || ||||| ||||| || ||||| || ||||||| || ||||| || Sbjct 2740580 AACGTACTACGAATCATCAACGAACCCACCGCTGCCGCTATTGCATACGGTCTTGACAA 2740522 Score = 104 bits (114), Expect = 2e-16 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| || | |||||| ||| ||| || |||||||| |||| | || | Sbjct 239604 AGACGGAGAACTAAATGAAGAGTAGATTCCTTCTGGATATTGTAGTCAGACAAGGTGCGA 239545 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||||| ||||| ||||| | |||||| || || || || || |||||| Sbjct 239544 CCATCTTCCAACTGTTTGCCGGCGAAAATTAATCTTTGTTGGTCTGGGGGGATGCCTTCT 239485 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 ||||| ||||| ||| || || ||||| || || | | | | | ||| | || Sbjct 239484 TTATCCTGAATCTTTGCCTTAACGTTTTCAATGGTGTCGGAG-GCCTCGACTTCCAAGGT 239426 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | |||||||| ||||||||||| || ||||||||||| Sbjct 239425 GATTGTTTTACCGGTAAGAGTTTTGACAAAAATTTGCAT 239387 Score = 98.7 bits (108), Expect = 8e-15 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| || | ||||| ||| ||| || ||||||||| || | | || | Sbjct 240061 GAGACGGAGAACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAGTCGGACAAGGTGCG 240002 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| | ||||| |||||||| || | |||||| ||||| || ||||||||||| Sbjct 240001 ACCATCTTCCAACTGTTTACCGGCAAAGATCAATCTTTGTTGATCTGGGGGAATTCCTTC 239942 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||| || || |||||| ||| || || || || || | | | | | ||| | | Sbjct 239941 TTTGTCCTGGATTTTTGCTTTGACGTTTTCGATGGTGTCGGAG-GCCTCGACTTCCAAGG 239883 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || |||||||| | ||||| || |||||||||||| Sbjct 239882 TGATGGTCTTACCAGTTAACGTTTTCACAAAAATTTGCATA 239842 Score = 91.5 bits (100), Expect = 1e-12 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 ||| || || ||||| |||||||| ||||| | |||||||| || || ||||||||||| Sbjct 239086 ATCCTCCAGCTGTTTGCCGGCAAAGATAAGACGCTGCTGATCTGGCGGGATTCCTTCTTT 239027 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAA 563437 || |||||||| ||| || || || || |||| | ||| ||| ||||||| Sbjct 239026 GTCCTGAATTTTAGCTTTCACATTTTCGATCGTGTCAGAGGCCTCTAC-TTCCAGAGTAA 238968 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||| || || | || |||||||| || ||||| Sbjct 238967 TAGTTTTGCCCGTCAATGTCTTAACGAAGATCTGCAT 238931 Score = 89.7 bits (98), Expect = 4e-12 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| || || || | ||| ||||| |||||| || ||||| || | || || | Sbjct 241632 GAGCCGCAGAACCAAATGGAGGGTTGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCG 241573 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||| || || ||||| |||||||| || || | || || || || ||||||||||| Sbjct 241572 ACCATCCTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGTTGGTCTGGCGGAATTCCTTC 241513 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAG 563434 ||| || |||||||| ||| || ||||| || || | || | | ||| || | Sbjct 241512 TTTGTCCTGAATTTTAGCTTTCACATTTTCAATGGTGTCCG-ATGCTTCAACTTCCAGGG 241454 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | ||||| ||||| || ||||| ||||| ||||||||| Sbjct 241453 TGATGGTTTTGCCAGTTAGGGTTTTGACGAAGATTTGCATA 241413 Score = 89.7 bits (98), Expect = 4e-12 Identities = 187/274 (68%), Gaps = 5/274 (2%) Strand=Plus/Plus Query 428254 TGTAAAGATATATCTTGCGCTTGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTG 428313 |||||| ||||| | | || || |||||||| |||||| | || ||||||||||| Sbjct 1661214 TGTAAAAATATAACGAGGACTGGCTGAATCTTTTCCTCCTATGAGCCTGGTTCCAAATTG 1661273 Query 428314 TCCATTAGGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAAC 428373 || | || | || ||||| |||||||| |||||| ||||||| |||| |||||| Sbjct 1661274 ACCGATTGGTTGGAGCAAGTTAATGTTATTACTACCCACAAAATTTTGCGCCAAATTAAC 1661333 Query 428374 AATGGTACTAGTTAAG-GATTGTTCACCATGATGATATTTAGTTCTTTTTGAAACTGCAC 428432 ||||| | |||| || ||| || |||||||| || | || | ||||| || Sbjct 1661334 TATGGT-TGACATAAGAGAAACTTCGCCGTGATGATAAGCAGATTGTTCGGCAACTGAAC 1661392 Query 428433 CTTGTAATTCTGATACCTTTATTTCTTCTTTATAAATACCTTCTTCTACTGATCCATAAA 428492 | | | || |||||| ||||| ||||| ||| | ||| | || || | Sbjct 1661393 CAGCCAGCTGTGCTACCTTAATTTCACGTTTATCGTTACGT--TTC-ATGCATGTGTACA 1661449 Query 428493 ATACTTTGCGTTGTGATGGTTTGAATCCATCCAT 428526 |||||| | |||| ||||| |||||||| || Sbjct 1661450 TTACTTTTCTTTGTCCAGGTTTCAATCCATCGAT 1661483 Score = 86.0 bits (94), Expect = 5e-11 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || || | |||||||| |||||| || ||||| || | || || | Sbjct 241176 GAGACGAAGAACCAAGTGAAGGGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCG 241117 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| | ||| ||||||||||| || ||||| ||||| || || || ||||| || Sbjct 241116 GCCATCTTCCAATTGCTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGTGGGATTCCCTC 241057 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAG 563434 || || || || || || || ||| || ||||||| || || ||| || | Sbjct 241056 CTTGTCCTGGATCTTAGCCTTCACATTCTCGATAGTATCAGATGCTTCGAC-TTCCAGGG 240998 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | ||||| || || ||||| || || || ||||||||| Sbjct 240997 TGATGGTTTTGCCGGTCAGAGTCTTGACAAAGATTTGCATA 240957 >seq46 Length=770283 Score = 154 bits (170), Expect = 1e-31 Identities = 360/535 (67%), Gaps = 16/535 (3%) Strand=Plus/Plus Query 368611 TGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGTATAGGT 368670 ||||||| ||||| ||| | ||| ||||| ||| |||| || |||||| | || Sbjct 470875 TGGGGAAACCCAATACCACTTTGGGTGTCTGAGGATAAACAAGAGATAGTTTGTGTTGGG 470934 Query 368671 TCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACATATTGAT 368730 ||| |||||||| | |||| |||| | | ||| ||| ||| | || || Sbjct 470935 AGTATTGAAGAATTGGAGCAATTGACTGGCG--CTAAA-ATTGAAGATATTCACCGCGAA 470991 Query 368731 AAAATTGATCACATTAAAATTCCATCAAAGAAA---GGAAAAGGTTTATTGTCTCGAGTT 368787 | |||||||| | | ||||||||| ||| ||| | |||| |||| Sbjct 470992 AGTATTGATCATCTGATAATTCCATCTAAGCGCCCTGGACAGCCACCATTGAAAAGAGTA 471051 Query 368788 GAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTAT 368847 | ||| || || ||||||||||| || || || |||||||||| ||| || |||||| Sbjct 471052 ACCGAAGTATTTGACTGCTGGTTTGAGTCCGGATCGATGCCTTATGCTCAGATGCATTAT 471111 Query 368848 CCATTTGATAACG-CAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAAC 368906 || ||||| | | |||| | ||| ||| ||| || | ||||||||| | | Sbjct 471112 CCGTTTGAAAGAGTCAAAGT--TTT-----TGAAGAAGGTTTTCCAGCTGATTTTATTGC 471164 Query 368907 AGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTAT 368966 ||| ||||||||||| ||||| ||||| ||||| | || || | || || || | Sbjct 471165 CGAAGGTATTGATCAAACTCGTGGCTGGTTCTATACATTGTTGGTCATTTCTACTGCCCT 471224 Query 368967 TTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTGATGG 369026 || | ||||| | ||||||||| || | | | |||| | || ||| ||||||| Sbjct 471225 GTTTGGCAAACCTCCATTTAAAAATCTAGTTGCTAATGGTCTAGTCCTTGCTGCTGATGG 471284 Query 369027 TCAAAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATT 369086 ||||| ||||| ||| | || || ||| | || || || | || | ||||||| Sbjct 471285 GCAAAAAATGTCGAAACGGAAACAAAACTATCCAGACCCAAACAAAGTACTCAATAAATT 471344 Query 369087 TGGTGCTGATACTTTGAGATTATACCT-ATTGTCATCACCTGTAGTAAAAGCAGA 369140 ||| |||||| |||||||| |||| | ||| | ||||| ||||| | |||||| Sbjct 471345 TGGAGCTGATGCTTTGAGACTATATTTGATTAAC-TCACCAGTAGTTAGAGCAGA 471398 >seq481 Length=1170399 Score = 123 bits (136), Expect = 2e-22 Identities = 137/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCA-AGAAGTTACGGATGCAGTAAT 550407 |||||||||||| ||||||| || | | ||| || | |||| | |||| ||| | Sbjct 1015581 ATGAAAATGAAAGAAACAGCGGAAGCGTAT-TTGAACACACCTGTTAAGAATGCCGTAGT 1015523 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 || ||||| || || || ||||||||||| | || || |||||||||||||||| || Sbjct 1015522 TACAGTACCTGCTTACTTCAATGACTCACAGAGACAGGCAACTAAAGATGCTGGACAAAT 1015463 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||| || ||||| ||| | ||||||| ||||| ||||| |||||| | || ||||| Sbjct 1015462 TGCTGGCCTCAATGTACTTAGGGTTATCAACGAACCCACTGCAGCTGCATTGGCTTATGG 1015403 >seq489 Length=571779 Score = 107 bits (118), Expect = 2e-17 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381 || ||| |||| || || ||||| | | ||| ||||| |||| || |||| | Sbjct 563765 CCCGAAGAAATATCCTCGATGGTACTCACGAAGATGAAGGAAACCGCGGAAGCTTACCTG 563824 Query 550382 GGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACG 550440 || |||| | |||| |||| || || || || ||||| ||||| || || || ||||| Sbjct 563825 GGA-AAGACAATTACAAATGCCGTCATCACGGTGCCAGCTTATTTCAACGATTCTCAACG 563883 Query 550441 TCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGA 550500 |||||| || |||||||| || |||| ||||||| ||||| || | ||||| ||||| Sbjct 563884 TCAAGCGACCAAAGATGCCGGCGCTATTTCTGGACTGAATGTCCTCAGGATTATTAATGA 563943 Query 550501 ACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||| || || || || | || ||||| || || || Sbjct 563944 ACCGACCGCGGCAGCCATAGCTTATGGTCTCGACAA 563979 >seq187 Length=42613 Score = 107 bits (118), Expect = 2e-17 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381 || ||| |||| || || ||||| | | ||| ||||| |||| || |||| | Sbjct 39848 CCCGAAGAAATATCCTCGATGGTACTCACGAAGATGAAGGAAACCGCGGAAGCTTACCTG 39789 Query 550382 GGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACG 550440 || |||| | |||| |||| || || || || ||||| ||||| || || || ||||| Sbjct 39788 GGA-AAGACAATTACAAATGCCGTCATCACGGTGCCAGCTTATTTCAACGATTCTCAACG 39730 Query 550441 TCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGA 550500 |||||| || |||||||| || |||| ||||||| ||||| || | ||||| ||||| Sbjct 39729 TCAAGCGACCAAAGATGCCGGCGCTATTTCTGGACTGAATGTCCTCAGGATTATTAATGA 39670 Query 550501 ACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||| || || || || | || ||||| || || || Sbjct 39669 ACCGACCGCGGCAGCCATAGCTTATGGTCTCGACAA 39634 >seq496 Length=1672140 Score = 89.7 bits (98), Expect = 4e-12 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 |||||||| |||| ||||| | |||||| |||||||| || ||||| || | ||| Sbjct 1564659 ATATTGTAGTCAGAGAGAGTACGACCATCTTCTAGTTGTTTACCAGCAAAGATCAATCTC 1564600 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||||||||| ||||||||||| || || || || || || || ||||| ||| Sbjct 1564599 TGCTGATCAGGTGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTGACATTTTCAATAGTA 1564540 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | | | || || || || | |||||||| || || || || ||||| || || Sbjct 1564539 TC-GGAAGCCTCCACCTCAAGGGTGATGGTTTTACCCGTCAGGGTCTTCACGAAGATCTG 1564481 Query 563472 CAT 563474 ||| Sbjct 1564480 CAT 1564478 >seq2 Length=4278185 Score = 86.0 bits (94), Expect = 5e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 552402 TTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGA 552461 || ||||| ||||||||| ||| |||| || |||||| | | |||||| ||| || Sbjct 689146 TTCTCTACAGCTTCAGATAACCAACACACTGTGACTATTCAAGTCTATGAAGGTGAACGA 689087 Query 552462 AAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCT 552521 | | ||||| || || || ||||| | || || | || || || || || Sbjct 689086 CCAATGACTAAGGACAACCATTTGCTTGGCAAGTTCGATCTCACTGGAATCCCACCAGCA 689027 Query 552522 CCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAAT 552581 ||| | ||| | || ||||||||||| || ||||| |||||||||||||| || || | Sbjct 689026 CCTAGAGGAATTCCACAAATTGAAGTGACATTCGAAATCGATGCCAATGGTATCCTGCAA 688967 Query 552582 GTGACTGCTTGTGATAA 552598 || ||||| ||||| Sbjct 688966 GTATCTGCTGAAGATAA 688950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029268394285780