Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq142 89.7 1e-12 >seq142 Length=137952 Score = 89.7 bits (98), Expect = 1e-12 Identities = 128/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| || || |||||||| | || || | ||||| ||||| | || |||||| Sbjct 57278 TGGGCAATAAATTGGATCAATCATGATAGTGCAAATTTTGGAGAGCGAGTCGTGGCCTTT 57337 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 || || || || || ||||||||||||||| ||||| ||||| |||||||| ||| | Sbjct 57338 GCAGCAGTAGAAGGAATCTTTTTCAGCGGTAGTTTTGCTGCCATATTCTGGCTGAAG-AA 57396 Query 25954 AAGGGGAC-CATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGA 26006 | | |||| ||||| ||||| ||||| ||| || ||||| ||| ||||| Sbjct 57397 ACGCGGACTTATGCCTGGGCT-AACTTTCAGCAATGAACTCATTTCCAGAGACGA 57450 Score = 86.0 bits (94), Expect = 1e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || ||||| ||||||||||| |||||||| || || ||||||||||| |||| |||| Sbjct 56945 GTTTTGGCCTTCTTTGCAGCATCTGATGGAATTGTCAACGAGAATCTCGTCGAGCGATTT 57004 Query 25657 A-CCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGA 25715 | |||| | | | ||| ||| || ||||| || |||||||| || ||||| || Sbjct 57005 AGTCAGGAAGTTACTGTA-ACGGAAGCACGATGTTTTTATGGTTTCCAAATAGCCATGGA 57063 Query 25716 AAATGTGCACTCTGAGGTGTA 25736 ||| || || || ||| |||| Sbjct 57064 AAACGTCCATTCCGAGATGTA 57084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928838739287680