Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 7e-14 >seq2 Length=4278185 Score = 91.5 bits (100), Expect = 7e-14 Identities = 200/300 (67%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 25999 ATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGC 26058 ||| ||||| || || ||||| || |||| ||||| ||||| ||||||||||| || || Sbjct 517115 ATTTTTTTTAAGGTCCAAGAACTCGAAAACATCTGCATGCCAGGGTTCTAAATATATGGC 517174 Query 26059 AAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAAC 26118 |||| ||| | ||| ||||| || || ||||||||||| || | |||| | || Sbjct 517175 AAAAGCACCGGGCCGTTTATTGCCACCCTGGTCAACGTATCTTGCTGTATTATTGTATAC 517234 Query 26119 TTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGT 26178 | ||| || || | ||| | ||| |||||| || | | || | | ||| | Sbjct 517235 ACGTAGCATGGGCACCAGGCCACTAGAATCTCCGTTAGTTCCAGCTATGTAAGTACCTTT 517294 Query 26179 CGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA 26238 | ||| || || ||| | |||| ||| ||||| |||| ||| |||||| Sbjct 517295 GGCTCTGATGCAATGCACATTCAAGCCGACTCCTCCAGCAGATTTACTTATAAGTGCACA 517354 Query 26239 ATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACA 26298 | | | |||||| ||||||||| || || || | ||||| ||||| ||||| Sbjct 517355 CTGTTTCAGCGTATCGTAAATTCCTTCGATACTGTCCTCCTTCATAGTTAATAGGAAACA 517414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038390191150