Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq495 105 8e-17 >seq495 Length=2556717 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| || | | | ||| | || |||||||| || || || | | || Sbjct 1120643 GCTTGGCCAATTCACCAGGTAACAGCAGCCTGACCGCGGTCTGAATTTCCCGGGAGGTGA 1120702 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| |||| || ||||| ||||||| | ||||||| |||| | Sbjct 1120703 TGGTCGAGCGTTTGTTGTAGTGGGCGAGACGCGACGCCTCGGCGGCGATGCGTTCGAATA 1120762 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||||| |||| | || || || |||||||| Sbjct 1120763 TGTCGTTGACGAAGCTGTTCATGATGCTCATCGCCTTGCTCGATATTCCGGTGTCGGGGT 1120822 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || || || |||||||||||| Sbjct 1120823 GGACTTGTTTCAGAACCTTGTAGATG 1120848 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| || | | | ||| | || |||||||| || || || | | || Sbjct 1128580 GCTTGGCCAATTCACCAGGTAACAGCAGCCTGACCGCGGTCTGAATTTCCCGGGAGGTGA 1128639 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| |||| || ||||| ||||||| | ||||||| |||| | Sbjct 1128640 TGGTCGAGCGTTTGTTGTAGTGGGCGAGACGCGACGCCTCGGCGGCGATGCGTTCGAATA 1128699 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||||| |||| | || || || |||||||| Sbjct 1128700 TGTCGTTGACGAAGCTGTTCATGATGCTCATCGCCTTGCTCGATATTCCGGTGTCGGGGT 1128759 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || || || |||||||||||| Sbjct 1128760 GGACTTGTTTCAGAACCTTGTAGATG 1128785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107096362235474