Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 2e-14 >seq2 Length=4278185 Score = 95.1 bits (104), Expect = 2e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 172396 TCAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 172455 || |||||||| | ||| | || ||||| || || ||| | | | ||||| | || Sbjct 2655380 TCGAAGAACTTCTGTGGTTCATCAAAGGATCGACAGATGCCAGAGAATTAGCCAGCAGAG 2655321 Query 172456 GTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTG 172515 |||| || | ||||| | ||| || || | |||||| ||| ||| || |||| || Sbjct 2655320 GTGTGAATATCTGGAACGCCAATAGTACTAGATCATTTTTGGATAAATGTGGTTTTATTG 2655261 Query 172516 AAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTC 172575 | || | || ||||| ||||| ||| | ||||| ||||||||||||||| || || | Sbjct 2655260 ATCGAGACGAGGGTGACTTAGGTCCAGTCTATGGCTTTCAATGGAGACATTTTGGCGCAC 2655201 Query 172576 AATATATCGACTGTGATACAGATTACACAGGACAAGG 172612 | || | ||| ||||||| ||||| || |||| Sbjct 2655200 AGTACAAAGACATGAATACAGACTACACTGGGAAAGG 2655164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632485473005360