Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq223 127 3e-24 >seq223 Length=3708094 Score = 127 bits (140), Expect = 3e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| |||| || || || ||||| |||||||| | || || ||| || Sbjct 239160 TGCAAATATTCGTAAAGACCTTGACCGGAAAGACAATTACCTTGGAAGTCGAAGCCTCCG 239219 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| || |||||| || |||||||| || ||||| ||||||| Sbjct 239220 ATACTATTGAAAATGTCAAGGCTAAAATTCAGGACAAAGAAGGAATCCCACCAGATCAAC 239279 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| ||||||||||| || ||| | || || | || || || | Sbjct 239280 AGCGTCTTATCTTTGCCGGTAAACAATTGGAGGATGGCCGTACCTTGTCCGACTACAACA 239339 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||| ||||| ||| |||| || || Sbjct 239340 TCCAAAAGGAATCTACTCTCCACTTGGT 239367 Score = 96.9 bits (106), Expect = 5e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| ||||| || || || || || | || || || || Sbjct 239844 TGCAAATTTTTGTGAAAACGTTAACTGGTAAGACCATCACCTTGGAAGTCGAGGCCTCCG 239903 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || |||| || ||| ||||| || |||||||| ||||| || ||||||| Sbjct 239904 ACACCATCGAAAACGTCAAAGCAAAAATCCAGGACAAAGAAGGAATTCCCCCAGATCAAC 239963 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| |||||||| || || ||| | | || || | || || |||| Sbjct 239964 AAAGATTGATCTTTGCCGGTAAACAGTTGGAAGATGGTCGCACCTTGTCCGACTACAATA 240023 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||| ||||| ||| | || || || Sbjct 240024 TTCAAAAGGAATCTACTCTTCACTTGGT 240051 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || || |||||||| || | || || || || Sbjct 239388 TGCAAATTTTTGTCAAAACTCTTACCGGTAAAACAATCACCTTGGAAGTCGAGGCCTCCG 239447 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||| || || || || || |||||||||||| || || || |||| Sbjct 239448 ACACCATTGAAAACGTTAAGGCAAAGATTCAGGATAAAGAAGGCATCCCCCCAGACCAAC 239507 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | ||||| || || ||||| || || ||| | | || || | || || |||| Sbjct 239508 AAAGATTAATTTTCGCCGGCAAACAGTTGGAAGATGGTCGCACCTTGTCTGACTACAATA 239567 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || || ||||| ||| | |||||||| Sbjct 239568 TCCAGAAGGAATCTACTCTTCATTTAGT 239595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786161270264240