Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=4278185 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 168526 AAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 168585 |||||||| | ||| | || ||||| || || ||| | | | ||||| | ||||| Sbjct 2655377 AAGAACTTCTGTGGTTCATCAAAGGATCGACAGATGCCAGAGAATTAGCCAGCAGAGGTG 2655318 Query 168586 TTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAA 168645 | || | ||||||| ||| || || | |||||| ||| ||||||||||| || Sbjct 2655317 TGAATATCTGGAACGCCAATAGTACTAGATCATTTTTGGATAAATGTGGTTTTATTGATC 2655258 Query 168646 GAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAAT 168705 || | || ||||| ||||||||| | ||||| ||||||||||||||| || || || | Sbjct 2655257 GAGACGAGGGTGACTTAGGTCCAGTCTATGGCTTTCAATGGAGACATTTTGGCGCACAGT 2655198 Query 168706 ATATTGACTGTGATACAGATTACACCGGACAAGG 168739 | | ||| ||||||| ||||| || |||| Sbjct 2655197 ACAAAGACATGAATACAGACTACACTGGGAAAGG 2655164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635173455466160