Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq334 104 3e-17 >seq334 Length=3102202 Score = 104 bits (114), Expect = 3e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 140508 AATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAACGATCTTTTAAAAGATCAACGCGGG 140567 |||||||| | ||||||||| | |||||||||||| | || ||||| ||||| || Sbjct 1690744 AATTTTTGCCTGGGAAAACACTTGGGTAGTGAAAACGATTTATTGAAAGACCAACGTGGT 1690803 Query 140568 TCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCATATTTAGGTAAACCGTCT 140627 || || || || || || || || ||| | | || || || || ||||| ||||| || Sbjct 1690804 TCCCCAGCTTACATATCACCTGACGTTCTTTGTGGCAAGCCTTACTTAGGAAAACCTTCA 1690863 Query 140628 GATATGTGGGCGCTTGGAGTAACATTGTATACCATGTTGTTTGGGCAATTTCCATTTTAT 140687 || |||||||| || || || ||| | ||| ||| | | ||| ||||| ||||| || Sbjct 1690864 GACATGTGGGCTCTGGGTGTTGTATTATTTACAATGCTATATGGCCAATTCCCATTCTAC 1690923 Query 140688 GATGCGTCTCCAACAGAGCTCTTTAGAAAAATAAA 140722 || ||| ||| |||| || | || ||||| Sbjct 1690924 GACAGAAGTCCTACACAGCTTTTCAATAAGATAAA 1690958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704577802599840