Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq478 84.2 5e-11 >seq478 Length=952406 Score = 84.2 bits (92), Expect = 5e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395 |||||| | ||||| || | ||||| | ||| ||||| ||||| | || |||||| Sbjct 375056 TTCAATCGCCAACCGTCGTTACATAAGCTTAGTATCATGGCACATAAGGCTAAGGTATTA 374997 Query 305396 TCTGGATTGACATTTC-GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGA 305454 | || || ||| |||| || | | ||| ||| || || |||||||| |||||||| Sbjct 374996 GA-GCATCGAACCTTCAGATTTAACGAATGTGTTTGCACTCCATATAATGCTGATTTTGA 374938 Query 305455 TGGAGATGAAATGAATATGCATGTACCTCA 305484 || |||||||||||| ||||| |||| || Sbjct 374937 CGGGGATGAAATGAATCTGCATTTACCGCA 374908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186804862447642