Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq495 102 1e-15 >seq495 Length=2556717 Score = 102 bits (112), Expect = 1e-15 Identities = 165/234 (71%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| || || || || |||||| |||| || || | |||| | Sbjct 1120847 ATCTACAAGGTTCTGAAACAAGTCCACCCCGACACCGGA-----ATA-TCGAGCAAGGCG 1120794 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||||| || Sbjct 1120793 ATGAGCATCATGAACAGCTTCGTCAACGACATATTCGAACGCATCGCCGCCGAGGC--GT 1120736 Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 ||| || || | || |||||| ||| || ||| | | || || || |||||||| | Sbjct 1120735 CGCGTCTCGCCCACTACAACAAACGCTCGACCATCACCTCCCGGGAAATTCAGACCGCGG 1120676 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||| | | | || ||| |||||| |||||||||| |||||||||| Sbjct 1120675 TCAGGCTGCTGTTACCTGGTGAATTGGCCAAGCACGCCGTCAGTGAGGGCACCA 1120622 Score = 102 bits (112), Expect = 1e-15 Identities = 165/234 (71%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| || || || || |||||| |||| || || | |||| | Sbjct 1128784 ATCTACAAGGTTCTGAAACAAGTCCACCCCGACACCGGA-----ATA-TCGAGCAAGGCG 1128731 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||||| || Sbjct 1128730 ATGAGCATCATGAACAGCTTCGTCAACGACATATTCGAACGCATCGCCGCCGAGGC--GT 1128673 Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 ||| || || | || |||||| ||| || ||| | | || || || |||||||| | Sbjct 1128672 CGCGTCTCGCCCACTACAACAAACGCTCGACCATCACCTCCCGGGAAATTCAGACCGCGG 1128613 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||| | | | || ||| |||||| |||||||||| |||||||||| Sbjct 1128612 TCAGGCTGCTGTTACCTGGTGAATTGGCCAAGCACGCCGTCAGTGAGGGCACCA 1128559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177760852140564