Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq223 89.7 4e-13 >seq223 Length=3708094 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || |||||| || || || ||||| || || | | || || | || || Sbjct 239139 ACCAAGTGCAGCGTGGATTCCTTCTGAATATTGTAGTCCGACAACGTGCGACCATCCTCC 239080 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||||||||| ||||| |||||||||||||| || | || | | ||||||||| Sbjct 239079 AGCTGTTTGCCGGCAAAGATAAGACGCTGCTGATCTGGCGGGATTCCTTCTTTGTCCTGA 239020 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 ||||| ||| | | | | ||| || | ||| || |||| || ||| |||| Sbjct 239019 ATTTTAGCTTTCACATTTTCGATCGTGTCAGAGGCCTCTACTTCCAGAGTAATAGTTTTG 238960 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||||| || ||||| ||||| ||||| Sbjct 238959 CCCGTCAATGTCTTAACGAAGATCTGCAT 238931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429542867284586