Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athalia_20rosae_20[refseq_20GCF_5F000344095.1_202013-03-05] 522 sequences; 163,837,890 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq142 104 2e-17 >seq142 Length=137952 Score = 104 bits (114), Expect = 2e-17 Identities = 128/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 4821 TAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAAT 4880 || || || || || ||| ||||| || ||||| | ||||| || || || || || Sbjct 57105 TAGGTATCAATGAGAAGGGAGTACATCTCGGAATGGACGTTTTCCATGGCTATTTGGAAA 57046 Query 4881 CCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTT 4940 || ||||| |||| ||||| ||||| |||||| | || ||||| || || | || Sbjct 57045 CCATAAAAACATCGTGCTTCCGTTACAGTAACTTCCTGACTAAATCGCTCGACGAGATTC 56986 Query 4941 TCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT 4995 ||||| || || || ||| |||||||| || ||||||||||| |||||||||| Sbjct 56985 TCGTTGACAATTCCATCAGATGCTGCAAAGAAGGCCAAAACATGCGATATAAAGT 56931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046883163826