Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq14 102 6e-17 >seq14 Length=6127344 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| |||||| || |||||||||||||||||| || | | || ||| Sbjct 6013777 ACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTTCTGCCATCTTCC 6013836 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | |||||| |||||||| |||| |||||||| || || || | ||||| |||||| | Sbjct 6013837 AATTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGA 6013896 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | |||| | | || || || | |||||| || || Sbjct 6013897 ATTTTGGCCTTTACGTTTTCGATGGTGTCTGAAGCTTCGACTTCGAGGGTAATGGTTTTA 6013956 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || ||||| ||||| || |||||||| Sbjct 6013957 CCAGTGAGAGTTTTCACGAAAATTTGCAT 6013985 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45121 TCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATC 45180 || ||| || ||||| || ||| || || || |||||||| || || | | Sbjct 6013542 TCGTAAAACTAAGTGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCC 6013601 Query 45181 GTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTT 45240 || ||||||||||| |||||||| |||| |||||||| || || || | ||||| || Sbjct 6013602 ATCTTCCAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTT 6013661 Query 45241 GTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAAT 45300 |||| |||||| ||| || | | | |||| | | || || || | |||||| Sbjct 6013662 GTCCTGAATTTTGGCCTTTACGTTTTCGATGGTGTCTGAAGCTTCGACTTCGAGGGTAAT 6013721 Query 45301 CGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || ||||| ||||| || |||||||| Sbjct 6013722 GGTTTTACCAGTGAGAGTTTTCACGAAAATTTGCAT 6013757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395061544719556