Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq30 87.8 2e-12 >seq30 Length=3857846 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 14240 ATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATT 14299 ||||||||||| || || | |||||||| | ||||||||| |||| |||||| || Sbjct 1771996 ATAAGTTCGTTGCTGAAGGTGAGACCTGGCATGACTCCTCGTTTCTTTAGCCAAAAAATG 1772055 Query 14300 GCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCT 14359 || ||||| || ||||| || ||||||||||| ||||| || | || ||||| Sbjct 1772056 GCTGCGAAACTGCCACTGAAGAAGATACCCTCAACTGCCGCAAATGCGACTACACGTTCG 1772115 Query 14360 CCAAACG--ATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAA 14417 ||||| ||| | || | | ||||| ||| ||||| | || || || || | Sbjct 1772116 GGAAACGTAGCGCTCTCATGATTG--ATCCAGTTTAATGCCCAATTAGCCTTCTTCTTGA 1772173 Query 14418 TAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | || | ||| ||||| ||||||||||| Sbjct 1772174 CACAAGGAAGTGTCTCAATCGCATTAAATAA 1772204 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/193 (70%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 14443 AAATAAATG-TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14501 ||||| || || ||| ||||| | | ||||| || || ||||| || || |||| Sbjct 1773189 AAATATATTCTTACTTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAGTACA 1773248 Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14561 | ||||| || || ||||| || || || ||||| ||||| ||||| | ||||| || Sbjct 1773249 TCTCAGAATGAATATTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGAAA 1773308 Query 14562 ATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTG 14621 || || ||| | ||||| || | ||| |||||||| |||||||| ||| | Sbjct 1773309 TTTTCACTTCTTGGCTGAATCTCTCAATTAGATTCTCATTAACGATACCATCGGAAGCGG 1773368 Query 14622 CAAAAAATGCCAA 14634 |||||||||| || Sbjct 1773369 CAAAAAATGCTAA 1773381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482328500848480