Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq15 105 1e-17 >seq15 Length=5896156 Score = 105 bits (116), Expect = 1e-17 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGT 35282 ||||| | || || || || || | |||||| ||| ||| | |||||||| | ||||| Sbjct 3065274 TTCCATTACTGACAACTAAACAAGTATTCTGGCGAGCAGTGATTGAAGAACTATTGTGGT 3065333 Query 35283 TCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACG 35342 | |||| || ||| | ||||||||||| | | ||| || ||||| ||| | | Sbjct 3065334 TTATCAAAGGATCGACAAATTCCAAAGAATTGTCGGACAAGGGTATTCACATTTGGGATG 3065393 Query 35343 CTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATT 35402 ||||| || || | || ||||| | || || || |||| ||||| |||| Sbjct 3065394 AAAATGGTTCACGAGCTTTCTTGGATTCCTGTGGCTTCACTGACAGAGAGGAGGGTGATT 3065453 Query 35403 TGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA 35448 ||||||| || ||||| ||||| ||||| | |||||||||||||| Sbjct 3065454 TGGGACCTGTGTACGGTTTCCAGTGGCGATACTTTGGTGCTGAATA 3065499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989548042228380