Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq15 89.7 5e-13 >seq15 Length=5896156 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 |||||||||||||| | ||| || || | | |||||| || |||||||| || ||| Sbjct 3065894 CCAGTAACATGAGCGATCATGTACGTCAGCAAGGAATATGACGCTATGTTAAATGGCACT 3065835 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 || |||||||||||| | || ||||| ||||| ||| | || |||| | ||| Sbjct 3065834 CCTAAACCCATGTCTGCGCTTCTTTGATAAAGCTGCGTGGACAATTCTCCGTTATTTACG 3065775 Query 20360 TAAAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTT 20418 |||||||| || || | || || ||||| | |||||| | | || |||| || Sbjct 3065774 TAAAATTGTACCAAAGTA-TGGCACGGCGGCAATGCCATCTTTGGAATATCAACCGGATT 3065716 Query 20419 CCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATT 20464 ||| || |||| || || | |||||| | ||| || |||||| Sbjct 3065715 CCAGGCTGACATTATAATACGTCTATCCTCAGGAGAATGCTTTATT 3065670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441357153334240