Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27]
2,836 sequences; 317,690,795 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq15 89.7 5e-13
>seq15
Length=5896156
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299
|||||||||||||| | ||| || || | | |||||| || |||||||| || |||
Sbjct 3065894 CCAGTAACATGAGCGATCATGTACGTCAGCAAGGAATATGACGCTATGTTAAATGGCACT 3065835
Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359
|| |||||||||||| | || ||||| ||||| ||| | || |||| | |||
Sbjct 3065834 CCTAAACCCATGTCTGCGCTTCTTTGATAAAGCTGCGTGGACAATTCTCCGTTATTTACG 3065775
Query 20360 TAAAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTT 20418
|||||||| || || | || || ||||| | |||||| | | || |||| ||
Sbjct 3065774 TAAAATTGTACCAAAGTA-TGGCACGGCGGCAATGCCATCTTTGGAATATCAACCGGATT 3065716
Query 20419 CCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATT 20464
||| || |||| || || | |||||| | ||| || ||||||
Sbjct 3065715 CCAGGCTGACATTATAATACGTCTATCCTCAGGAGAATGCTTTATT 3065670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441357153334240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |