Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq40 116 4e-21 >seq40 Length=2629504 Score = 116 bits (128), Expect = 4e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 159541 TCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAG 159600 || ||| | ||||| || |||||||| || |||| ||||| ||| || || || | Sbjct 2613054 TCGTGTCTGATGATCACGTATCCATCGACGAATGGAGTATTCGAAGAAACGATTAGTGAT 2612995 Query 159601 ATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAAT 159660 ||||| || || || || | ||||||||| |||||| | || ||||| ||| | ||| Sbjct 2612994 ATATGCAACATGGTGCACAACGCTGGTGGTCAAGTATATTTGGACGGTGCCAATATGAAT 2612935 Query 159661 GCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTA 159720 || || || ||| | ||| |||| ||||| || || | ||||| || || Sbjct 2612934 GCTCAAGTTGGTTTGTGTCGACCTGGTGATTATGGCAGCGACGTGTCACATCTCAATCTA 2612875 Query 159721 CATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||| || ||||| ||||| || || ||||| || ||||| | ||||||||||| || Sbjct 2612874 CATAAAACGTTCTGCATTCCTCACGGGGGTGGCGGACCTGGTATGGGTCCTATTGGAGT 2612816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588030353584960