Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq54 82.4 4e-11 >seq54 Length=1719504 Score = 82.4 bits (90), Expect = 4e-11 Identities = 126/179 (70%), Gaps = 3/179 (2%) Strand=Plus/Minus Query 25010 ATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAA 25069 || ||||||||||||||||| || | || | ||| || || | ||||||| Sbjct 1012576 ATGATAAATTCTCCAGACAATACGCGCCTCACATATATATTGCTTGTATACGGTTCAATG 1012517 Query 25070 CATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGC 25129 |||| || |||||||| || || | || || || |||||||| ||||||||| || Sbjct 1012516 GATTCGTTGTTTCCTAAAATCTGTGCCGTCGAGGCCGTTGGCATAGGTGCTATTAAAAGA 1012457 Query 25130 GAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC---TAAATT 25185 |||||||| | || | ||| | |||| ||| |||| ||||||||| |||||| Sbjct 1012456 GAATTTCTTACTCCGTGTTTCGCGATCTTCGCTTTCAATTCATCCCAATCCCATAAATT 1012398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253031253988700