Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq40 129 7e-25 >seq40 Length=2629504 Score = 129 bits (142), Expect = 7e-25 Identities = 172/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||||||||| | ||||| || ||||| || || ||||| ||||| || |||||| Sbjct 2612816 ACTCCAATAGGACCCATACCAGGTCCGCCACCCCCGTGAGGAATGCAGAACGTTTTATGT 2612875 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | || || ||||| |||| ||| | ||| || || ||| Sbjct 2612876 AGATTGAGATGTGACACGTCGCTGCCATAATCACCAGGTCGACACAAACCAACTTGAGCA 2612935 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| ||||| || | |||||| ||||||||| || || || || || ||||| Sbjct 2612936 TTCATATTGGCACCGTCCAAATATACTTGACCACCAGCGTTGTGCACCATGTTGCATATA 2612995 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421 | || || || ||| ||||| |||| ||||||||||| || ||||| | ||| || Sbjct 2612996 TCACTAATCGTTTCTTCGAATACTCCATTCGTCGATGGATACGTGATCATCAGACACGA 2613054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578977874506720