Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq15 102 1e-16 >seq15 Length=5896156 Score = 102 bits (112), Expect = 1e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 ||||||| || ||| |||| ||||| || || |||| ||| |||| || | ||| Sbjct 3065319 AAGAACTATTGTGGTTTATCAAAGGATCGACAAATTCCAAAGAATTGTCGGACAAGGGTA 3065378 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 || | ||||| |||| |||||||| || | || || |||| || || || ||||| | Sbjct 3065379 TTCACATTTGGGATGAAAATGGTTCACGAGCTTTCTTGGATTCCTGTGGCTTCACTGACA 3065438 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || | || |||||||| || || | || || || || ||| || | || ||| ||| Sbjct 3065439 GAGAGGAGGGTGATTTGGGACCTGTGTACGGTTTCCAGTGGCGATACTTTGGTGCTGAAT 3065498 Query 172579 ATATCGACTGTGATACAGATTACACAGGACAAGG 172612 | | ||| ||||| |||||||||||||||| Sbjct 3065499 ACAAAGACATGCATACAAATTACACAGGACAAGG 3065532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632467178243680