Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq43 87.8 3e-11 >seq43 Length=2330101 Score = 87.8 bits (96), Expect = 3e-11 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || || || || || || ||| |||||| | |||| ||| ||| ||| Sbjct 1006777 TGTACTTGGTTACTGCTTTCGTGCCTTCGCTGACTGCGTGCTTCGCCAATTCACCGGGCA 1006718 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| || || |||||||| || | | |||||| ||||||||| Sbjct 1006717 ACAGAAGTCTCACAGCCGTTTGGATCTCCCGAGAGGTGATCGTTGAGCGCTTGTTGTAAT 1006658 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| | | || || | | |||| | |||| | ||||||||||| ||||| Sbjct 1006657 GCGCTAATCTCGATGCTTCCGCGGCGATTCTCTCGAATACATCGTTGACAAAGCTGTTCA 1006598 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| ||||||| || ||| || || || ||||| | || |||| Sbjct 1006597 TGATGCTCATAGCTTTGCTGGAGATTCCGGTGTCCGGATGTACTTGCTTCAATACTTTGT 1006538 Query 1485710 A 1485710 | Sbjct 1006537 A 1006537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915944721745004