Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq15 104 3e-17 >seq15 Length=5896156 Score = 104 bits (114), Expect = 3e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171608 TTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 171667 || ||||||| || ||| |||| ||||| || || |||| ||| |||| || | | Sbjct 3065316 TTGAAGAACTATTGTGGTTTATCAAAGGATCGACAAATTCCAAAGAATTGTCGGACAAGG 3065375 Query 171668 GTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTG 171727 || || | ||||| |||| |||||||| || | || || |||| || || || |||| Sbjct 3065376 GTATTCACATTTGGGATGAAAATGGTTCACGAGCTTTCTTGGATTCCTGTGGCTTCACTG 3065435 Query 171728 AAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTC 171787 | ||| | || |||||||| || || | || || || || ||| || | || ||| Sbjct 3065436 ACAGAGAGGAGGGTGATTTGGGACCTGTGTACGGTTTCCAGTGGCGATACTTTGGTGCTG 3065495 Query 171788 AATATATCGACTGTTATACAGATTACACAGGACAAGG 171824 |||| | ||| ||||| |||||||||||||||| Sbjct 3065496 AATACAAAGACATGCATACAAATTACACAGGACAAGG 3065532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628508918568960