Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq30 105 8e-18 >seq30 Length=3857846 Score = 105 bits (116), Expect = 8e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 94814 TCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGC 94873 ||||||||||| |||||||||||||||||| ||| ||| || |||| ||||| Sbjct 1772104 TCGCATTTGCGGCAGTTGAGGGTATCTTCTTCAGTGGCAGTTTCGCAGCCATTTTTTGGC 1772045 Query 94874 TCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACG 94933 | ||||| ||||| |||||||||||||| |||| |||||| |||||||| || |||| Sbjct 1772044 TAAAGAAACGAGGAGTCATGCCAGGTCTCACCTTCAGCAACGAACTTATCTCACGAGACG 1771985 Query 94934 A 94934 | Sbjct 1771984 A 1771984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583240123404640