Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq20 100 3e-16 >seq20 Length=5370898 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087 |||||| ||||||| | ||||| | |||||| ||||| || || | || || || || Sbjct 500796 CGTGAAAATGTATCTCGGACTGGCAGAATCCTTTCCACCAGCAAGTCTTGTACCGAATTG 500855 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || ||||| || || || | ||| ||| |||||||||||||| || | ||| || Sbjct 500856 ACCGATGGGCTGTAGCAGATTAATGTTATTGCTACCCACGAAATTCTGCGCGAGATTAAC 500915 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 || || || |||| || |||||||| ||||| || | || || || | |||| Sbjct 500916 TATGGTCGCCATCAGAGACGTCTCACCGTGATGATAAGCAGAATGTTCGGCAACAGATCC 500975 Query 152208 CGCCAACTGCGCCACCTTCA 152227 |||||| ||||| || |||| Sbjct 500976 CGCCAATTGCGCGACTTTCA 500995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547196601192800