Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq15 93.3 4e-14 >seq15 Length=5896156 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582 ||||| || ||| | || | |||| || ||||| ||| ||| | || |||||| Sbjct 3065683 CCTGAGGATAGACGTATTATAATGTCAGCCTGGAATCCGGTTGATATTCCAAAGATGGCA 3065742 Query 34583 CTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAG 34642 | || |||||||| || | ||||| ||||| || || || ||||| ||| Sbjct 3065743 TTGCCGCCGTGCCATACTTTGGTACAATTTTACGTAAATAACGGAGAATTGTCCACGCAG 3065802 Query 34643 CTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCT 34702 || |||||| || | ||||||||| ||||| ||||| || ||||| || || | Sbjct 3065803 CTTTATCAAAGAAGCGCAGACATGGGTTTAGGAGTGCCATTTAACATAGCGTCATATTCC 3065862 Query 34703 CTGCTCACGTACATGATCGCTCATGT 34728 |||| |||||||||||||||||||| Sbjct 3065863 TTGCTGACGTACATGATCGCTCATGT 3065888 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 |||||||||||||||||||| |||| | || || ||||| || ||||| ||||| Sbjct 3065888 ACATGAGCGATCATGTACGTCAGCAAGGAATATGACGCTATGTTAAATGGCACTCCTAAA 3065829 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||||||| | || |||||| ||||| ||||| || || || ||||| ||| Sbjct 3065828 CCCATGTCTGCGCTTCTTTGATAAAGCTGCGTGGACAATTCTCCGTTATTTACGTAAAAT 3065769 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || | || |||||||| || | |||||| || | ||| ||| ||||| || Sbjct 3065768 TGTACCAAAGTATGGCACGGCGGCAATGCCATCTTTGGAATATCAACCGGATTCCAGGCT 3065709 Query 6797 CACATCACGATCCTTCTGTCATCAGG 6822 |||| | || | ||| || ||||| Sbjct 3065708 GACATTATAATACGTCTATCCTCAGG 3065683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448246509097920