Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq30 98.7 8e-16 >seq30 Length=3857846 Score = 98.7 bits (108), Expect = 8e-16 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876 ||||||||| || || || | ||||| |||||||| ||||||||||| ||||| || Sbjct 1773220 AATATAAGTTTCAATGAGCAAAGAGTACATCTCAGAATGAATATTTTCTATGGCAATTTG 1773279 Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936 ||| || || || || | ||||| | | || ||||| | | ||||| || | || Sbjct 1773280 AAAGCCATAGAAACAACGTGCTTCGGAAATTTTCACTTCTTGGCTGAATCTCTCAATTAG 1773339 Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAA 4993 || || || || ||||| || || |||||||| || ||||||||||| ||||| Sbjct 1773340 ATTCTCATTAACGATACCATCGGAAGCGGCAAAAAATGCTAAAACATGAGAGATAAA 1773396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427034839564388