Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20cephalotes_20[genbank_20GCA_5F000143395.2_202010-10-27] 2,836 sequences; 317,690,795 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq30 105 7e-18 >seq30 Length=3857846 Score = 105 bits (116), Expect = 7e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 ||||||| ||| | ||||| || ||||| || ||| ||||| |||||||||||| Sbjct 1773203 TTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAGTACATCTCAGAATGAATA 1773262 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880 ||||| || ||||| ||||| ||||| ||||| | ||||| || | || || || | Sbjct 1773263 TTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGAAATTTTCACTTCTTGG 1773322 Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940 ||||| | | || ||| || ||||| |||||||| ||| ||||| || || | | Sbjct 1773323 CTGAATCTCTCAATTAGATTCTCATTAACGATACCATCGGAAGCGGCAAAAAATGCTAAA 1773382 Query 23941 ACATATTTTATAAAATGTCTTTCATC 23966 |||| |||||| || | ||||| Sbjct 1773383 ACATGAGAGATAAAACGTTTCTCATC 1773408 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 |||||||| | ||||||||| || | |||||| || || || || || ||||| Sbjct 1772020 CCTGGCATGACTCCTCGTTTCTTTAGCCAAAAAATGGCTGCGAAACTGCCACTGAAGAAG 1772079 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 ||||||||||| |||||||| || || | |||| ||| || || | | || | Sbjct 1772080 ATACCCTCAACTGCCGCAAATGCGACTACACGTTCGGGAAACGTAGCGCTCTCATGATTG 1772139 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| ||| || ||||||||||||| || ||||| || ||| ||||| || || Sbjct 1772140 ATCCAGTTTAATGCCCAATTAGCCTTCTTCTTGACACAAGGAAGTGTCTCAATCGCATTA 1772199 Query 23749 AA 23750 || Sbjct 1772200 AA 1772201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521469513250400