Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1248 91.5 1e-13 >seq1248 Length=5779413 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| || ||||| | | ||| ||||| || || |||||||| | || || || ||| Sbjct 4700805 TATTCAGCACCAAAGTATCGCCACTGGAAACCGTACACAGGTCCCAAATCACCCTCCTCT 4700864 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || ||| ||| ||| ||| || | | | || |||||| ||||||||||||| Sbjct 4700865 CTGTCAGTGAAGCCACAGGAATCCAAGAAAGCTCGTGAACCATTTTCATCCCAAATGTGA 4700924 Query 97522 ACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCT 97581 | ||| | | | |||||| | || |||||| ||||||||||||| | |||| Sbjct 4700925 ATACCCTTGTCCGACAATTCTTTGGAATTTGTCGATCCTTTGATAAACCACAATAGTTCT 4700984 Query 97582 TCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629 || | || ||| ||| |||||| |||||||| | | |||||| Sbjct 4700985 TCAATTACTGCTCGCCAGAATACTTGTTTAGTTGTCAGTAATGGAAAA 4701032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346777449033500