Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1238 102 8e-17 >seq1238 Length=3292682 Score = 102 bits (112), Expect = 8e-17 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 16487 TTTTCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATA 16546 |||||||| ||| |||||||||| || || || ||| |||||| || ||||||||| Sbjct 3273225 TTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAATACATCTCAGAATGAATA 3273284 Query 16547 TTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAG 16606 || || || || || ||||| ||||| || || | |||||||| |||| ||||| | Sbjct 3273285 TTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGAAATTTTCACTTCTTGG 3273344 Query 16607 TAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGC 16662 || || || || || || ||||| || |||||| ||| |||||||| || Sbjct 3273345 CTGAATCTCTCAATTAGATTCTCATTAACGATACCATCGGAAGCGGCAAAAAATGC 3273400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462503038830000