Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1248 105 1e-17 >seq1248 Length=5779413 Score = 105 bits (116), Expect = 1e-17 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGT 35282 ||||| | || || || || || | |||||| ||| ||| | |||||||| | ||||| Sbjct 4701030 TTCCATTACTGACAACTAAACAAGTATTCTGGCGAGCAGTAATTGAAGAACTATTGTGGT 4700971 Query 35283 TCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACG 35342 | |||| || ||| | ||||||||||| | | ||| || ||||| ||| | | Sbjct 4700970 TTATCAAAGGATCGACAAATTCCAAAGAATTGTCGGACAAGGGTATTCACATTTGGGATG 4700911 Query 35343 CTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATT 35402 ||||| || || | || ||||| | || || || |||| ||||| |||| Sbjct 4700910 AAAATGGTTCACGAGCTTTCTTGGATTCCTGTGGCTTCACTGACAGAGAGGAGGGTGATT 4700851 Query 35403 TGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA 35448 ||||||| || ||||| ||||| ||||| | |||||||||||||| Sbjct 4700850 TGGGACCTGTGTACGGTTTCCAGTGGCGATACTTTGGTGCTGAATA 4700805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989564347480250