Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1181 199 9e-46 seq1163 179 9e-40 seq1238 122 2e-22 >seq1181 Length=949089 Score = 199 bits (220), Expect = 9e-46 Identities = 181/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| || | |||||| || || | ||||||||||||||||||||||||||| || Sbjct 809609 TCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCGGA 809668 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || ||| | || || ||||| || || || || |||||||| || |||||||| ||||| Sbjct 809669 TAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATTAGTCTTTGTTGATCGGGAGG 809728 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||||||||| ||||| || || || || ||||| | || || || ||| || Sbjct 809729 AATGCCTTCTTTATCTTGAATTTTCGCCTTCACGTTTTCAATCGTGTCTGAAGCTTCGAC 809788 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || |||||||| |||||||| || ||||| ||||| |||||||| Sbjct 809789 CTCCAGCGTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCAT 809836 Score = 183 bits (202), Expect = 7e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | ||| | || |||||||| ||||| |||||||||||||| ||||| ||| Sbjct 811431 ATTCCACCACGTAGACGGAGGACTAGATGCAATGTGGATTCTTTCTGAATGTTATAATCA 811490 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | |||||||| ||||||||||||||||| || | ||||| ||||| || Sbjct 811491 GAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGG 811550 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || ||||| || || || |||||||| | || || | || Sbjct 811551 GGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTTTCGATCGTGTCTGATGCCTCA 811610 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | |||||| ||||| || || || ||||| ||||| ||||||||| Sbjct 811611 ACTTCCAATGTAATGGTCTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 811661 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || | ||| || |||||||| |||||||||||||||||||| || || | ||| ||| Sbjct 810993 AGAACCAAATGCAAGGTAGATTCCTTCTGAATATTATAGTCAGAAAGTGTGCGACCATCT 811052 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||||||||| || || |||| |||||| || || ||||| |||||||| ||||| Sbjct 811053 TCAAGTTGTTTTCCGGCGAAGATTAACCTCTGCTGGTCCGGAGGAATTCCTTCCTTATCT 811112 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||| || ||||| ||||| || | || || | ||| || || | || || || Sbjct 811113 TGAATTTTGGCTTTGACATTCTCAATCGTGTCCGACGCTTCGACTTCCAAAGTGATTGTT 811172 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| ||||| ||||| || ||||| Sbjct 811173 TTACCGGTAAGCGTTTTAACAAAAATTTGCAT 811204 Score = 163 bits (180), Expect = 7e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| | || | ||| ||||| |||||||||||||||||||||||||| || || | | Sbjct 809847 AGCCTCAAAACCAAATGCAATGTGGATTCTTTCTGAATATTATAGTCAGAAAGTGTACGA 809906 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| |||||||| || || || || | ||||||||| || || || |||||||| Sbjct 809907 CCGTCTTCAAGTTGTTTCCCGGCGAAGATCAACCTCTGTTGGTCCGGTGGGATTCCTTCC 809966 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || ||||| || ||||| ||||| || | || || | ||| || || | || Sbjct 809967 TTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCTTCGACTTCCAAAGTG 810026 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| ||||| ||||| ||||| || ||||| Sbjct 810027 ATTGTTTTACCGGTAAGCGTTTTGACAAAAATTTGCAT 810064 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| | || | ||| ||||| ||||| ||||||||||| |||||||| || || | | Sbjct 810531 AGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGA 810590 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| |||||||| || || || || | |||||| || || || || |||||||| Sbjct 810591 CCGTCTTCAAGTTGTTTCCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCC 810650 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || |||||||| || ||||| ||||| || | ||||| | ||| || || | || Sbjct 810651 TTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATCCGACGCTTCGACTTCCAAAGTG 810710 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| ||||| ||||| ||||| || ||||| Sbjct 810711 ATTGTTTTACCGGTAAGCGTTTTGACAAAAATTTGCAT 810748 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 104356 ATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTG 104415 ||| ||||| ||||| ||||||||||| |||||||| || || | ||||||||| ||||| Sbjct 810317 ATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGACCGTCTTCAAGTTG 810376 Query 104416 TTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 ||| || || || || | ||| || || || || || |||||||| || |||||||| || Sbjct 810377 TTTCCCGGCGAAGATCAACCTTTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGAATTTT 810436 Query 104476 TGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| ||||| || | ||||| | ||| || || | || || || ||||| || Sbjct 810437 GGCTTTGACATTCTCGATCGTATCCGACGCTTCGACTTCCAAAGTGATTGTTTTACCGGT 810496 Query 104536 AAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| ||||| || ||||| Sbjct 810497 AAGCGTTTTGACAAAAATTTGCAT 810520 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 104356 ATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTG 104415 ||| ||||| ||||| ||||||||||| |||||||| || || | ||||||||| ||||| Sbjct 810089 ATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTACGACCGTCTTCAAGTTG 810148 Query 104416 TTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 ||| || || || || | ||| || || || || || |||||||| || |||||||| || Sbjct 810149 TTTCCCGGCGAAGATCAACCTTTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGAATTTT 810208 Query 104476 TGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| ||||| || | || || | ||| || || | || || || ||||| || Sbjct 810209 GGCTTTGACATTCTCGATCGTGTCCGACGCTTCGACTTCCAAAGTGATTGTTTTACCGGT 810268 Query 104536 AAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| ||||| || ||||| Sbjct 810269 AAGCGTTTTGACAAAAATTTGCAT 810292 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| | ||| | ||| || |||||||| |||||||||||||||||||| || || | | Sbjct 811215 AGCCTCAATACCAAATGCAAGGTAGATTCCTTCTGAATATTATAGTCAGAAAGTGTGCGA 811274 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||||||||| || || || | ||||| ||||| || || ||||||||| Sbjct 811275 CCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGATCCGGGGGGATTCCTTCT 811334 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || | ||||| || || || ||||| || | || || | || | || | || Sbjct 811335 TTGTATTGAATTTTGGCCTTGACATTCTCGATAGTGTCTGACGCCTCAATTTCCAACGTG 811394 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || ||||| || || || ||||| ||||| ||||||||| Sbjct 811395 ATGGTCTTTCCTGTCAGGGTTTTGACAAAAATCTGCATT 811433 Score = 140 bits (154), Expect = 7e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 || || || | ||| | || ||||| || |||||||| || ||||| | ||| | || Sbjct 811674 CTGAGGACCAAATGGAGAGTGGATTCCTTTTGAATATTGTAATCAGACAAAGTACGTCCA 811733 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 ||||| || || ||||||||||| || | | ||| |||||||| || || ||||||||| Sbjct 811734 TCTTCCAGCTGCTTTCCAGCAAATATCAAACGCTGCTGATCAGGTGGGATGCCTTCTTTA 811793 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 ||||| |||||||||||||| || || | ||| || || || || || || || || Sbjct 811794 TCCTGGATCTTTGCTTTTACGTTCTCGATGGTGTCAGAAGCCTCAACTTCAAGAGTTATG 811853 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || | ||| || || || |||||||| Sbjct 811854 GTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 811888 >seq1163 Length=8263949 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | |||||||| |||||||| || |||||||| |||||||| || || Sbjct 3693299 AGAACAAGATGAAGCGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCATCC 3693358 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 |||||||| ||||||||||| || | | |||||||| ||||| || ||||||||||| Sbjct 3693359 TCTAGTTGCTTTCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTATCT 3693418 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| ||||| |||||||| | || || || ||| ||||| || || || || Sbjct 3693419 TGGATCTTAGCTTTGACATTTTCGATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGTT 3693478 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||||||||| || ||||| Sbjct 3693479 TTTCCAGTGAGGGTTTTTACAAAGATTTGCAT 3693510 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || || || | |||||||||||| ||||| || ||||| Sbjct 3691913 ATTCCTCCTCGAAGACGCAGAACCAGGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCG 3691972 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || ||||| |||||||| || || ||||| || | ||||||||| || Sbjct 3691973 GAAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCGGT 3692032 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||||||||| || || |||||||| ||||| | || || || ||| Sbjct 3692033 GGAATTCCTTCTTTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTTCG 3692092 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || ||||| || ||||| || || ||||| || || || |||||| Sbjct 3692093 ACTTCGAGAGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3692143 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || || || | |||||||||||| ||||| || ||||| Sbjct 3692141 ATTCCTCCTCGAAGACGCAGAACCAGGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCG 3692200 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || ||||| |||||||| || || ||||| || | ||||||||| || Sbjct 3692201 GAAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCGGT 3692260 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||||||||| || || |||||||| ||||| | || || || ||| Sbjct 3692261 GGAATTCCTTCTTTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTTCG 3692320 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || ||||| || ||||| || || ||||| || || || |||||| Sbjct 3692321 ACTTCGAGAGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3692371 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || || || | ||| |||||||| ||||| || ||||| Sbjct 3692369 ATTCCTCCTCGAAGACGCAGAACCAGGTGAAGTGTGGATTCTTTTTGAATGTTGTAGTCG 3692428 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || ||||| |||||||| || || ||||| || | ||||||||| || Sbjct 3692429 GAAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCGGT 3692488 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||||||||| || || |||||||| ||||| | || || || ||| Sbjct 3692489 GGAATTCCTTCTTTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTTCG 3692548 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || |||||||| ||||| || || ||||| || || || |||||| Sbjct 3692549 ACTTCGAGAGTAATAGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3692599 Score = 168 bits (186), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || || || | || |||||||||||||| || ||||| Sbjct 3692825 ATTCCTCCTCGAAGACGCAGAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCG 3692884 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || ||||| | |||||| || || ||||| || | ||||||||| || Sbjct 3692885 GAAAGAGTTCTGCCATCTTCCAATTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGT 3692944 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| ||||| |||||||| || || ||||| ||||| | ||| || || ||| Sbjct 3692945 GGAATTCCCTCTTTGTCCTGAATTTTAGCCTTTACGTTTTCGATGGTGTCTGAAGCTTCG 3693004 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || ||||| || |||||||| || ||||| || || || |||||| Sbjct 3693005 ACTTCGAGGGTAATGGTTTTACCAGTGAGAGTTTTCACGAAAATTTGCATT 3693055 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || || || | || |||||||||||||| || || || Sbjct 3693053 ATTCCTCCTCGAAGACGCAGAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAATCG 3693112 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||||||||| ||||| | |||||| || || ||||| || | ||||||||| || Sbjct 3693113 GAAAGAGTTCTACCATCTTCCAATTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGT 3693172 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| ||||| |||||||| || || ||||| ||||||| || || | ||| Sbjct 3693173 GGAATTCCCTCTTTGTCCTGAATTTTGGCCTTTACGTTTTCTATTGTGTCAGAGGCTTCA 3693232 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || ||||| ||||| || |||||||| |||||||| Sbjct 3693233 ACTTCAAGGGTGATGGTTTTACCCGTAAGAGTCTTTACAAAGATCTGCAT 3693282 Score = 159 bits (176), Expect = 8e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| |||| || | || || || || | || |||||||||||||| || ||||| Sbjct 3692597 ATTCCTCCTCGAAGACGCAGAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCG 3692656 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||||||||| ||||| | |||||| || || ||||| || | ||||||||| || Sbjct 3692657 GAAAGAGTTCTACCATCTTCCAATTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGT 3692716 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| ||||| |||||||| || || ||||| ||||||| || || | ||| Sbjct 3692717 GGAATTCCCTCTTTGTCCTGAATTTTGGCCTTTACGTTTTCTATTGTGTCAGAGGCTTCA 3692776 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || ||||| || || ||||| || || || |||||| Sbjct 3692777 ACTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3692827 >seq1238 Length=3292682 Score = 122 bits (134), Expect = 2e-22 Identities = 172/239 (72%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 268815 AAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTA 268874 |||| |||| | || || | | | ||||| ||| || || | || |||||||| | | Sbjct 3273444 AAAAACTAAATTCCGATGAGAAACGTTTTATCTCTCATGTTTTAGCATTTTTTGCCGCTT 3273385 Query 268875 GTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTG 268934 |||||||||||||| || |||||| | |||| ||| | ||||| || | ||| | | Sbjct 3273384 CCGATGGTATCGTTAATGAGAATCTAATTGAGAGATTCAGCCAAGAAGTGAAAATTTCCG 3273325 Query 268935 AAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACA 268994 |||| | ||||| || || || || || || ||||||||||||||||| |||||||| Sbjct 3273324 AAGCACGTTGTTTCTATGGCTTTCAAATTGCCATAGAAAATATTCATTCTGAGATGTATT 3273265 Query 268995 GTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTAT-TTTCTTC 269052 | | | || || |||||||| |||| || |||||| |||| ||| ||| ||| Sbjct 3273264 CTTTGCTCATTGAAACTTATATTTCTGATCCAAAAGAAAAG-TAAGAATATATTTGTTC 3273207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151375533947400